| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1137 |
|---|
| Symbol | |
|---|
| ID | 6115371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1461345 |
|---|
| End bp | 1463174 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641632620 |
|---|
| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001759525 |
|---|
| Protein GI | 170725499 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGT TCCAATCGAT TAATGAATTT GTGGTGCGTT TTGCGAATAC AAACGGGACA
GGTTCGGCGA GTGCGAATAA TATGTTTGCC AAAGCCATTA TGCGTATGGG CCTGCCAGTA
AGTGCTAAGA ATATCTTCCC CTCTAACATA CAGGGGATGC CAACTTGGTT TGAGGTAAGG
ATCAGCGAGA AAGGCTTTTT GGGACGTCGT GATGGTGCAC CTGAGCTGGT GGTCGCGATG
AATGCTCAAT CTATTGAGGA GGATATTCAA TCTGTCCAGC CGGGCGGTTT TTTGCTCTAT
GATTCCAGCC GCATCTTGCC CCAGAGGTTG ATGCGAAAAG AGATTAACTT TTTAGGCATG
CCTATCTCAG ATATCTGCCG CGCAGAGTAC AGCGATCCCC GTCAACGTCA GCTGTTTAAA
AATGTTATCT ATGTGGGGGC GCTCGCTGCG CTACTTGATA TCGATTTTCA GGTGCTTAAA
GATCTCGTTT CAGACCAGTT TAAGGGCAAA GATAAGCTAA TTCGGCCCAA TATCTATGCT
TTAGAGCTAG GTTTTGAGTT CGCCAATAAG CAGTTTTCTT GCCCTCTGCC AATCTGTGTG
GAGAGGCGTG ACTTGATAGG TGACAGGATC TTAGTTGATG GCAATACCGC TTCTGGTTTA
GGGGCGGTTT ATGGTGGCGC TACTGTGGTT GGCTGGTACC CGATCACGCC ATCTACCTCT
GTGATAGAGA AGTTTGCCTC CTACTGCCAG CGCTTACGAA TAGACCCAGC AAACGGGCAA
AAAAACTATG CCATCGTGCA GGCTGAAGAT GAGTTGTCTG CTATTGGTAT TGCCATGGGA
GGTGGCTGGA ATGGTGCTAG GGCATTTACT GCCACCAGTG GGCCGGGGAT CTCCTTGATG
ACAGAGTTTC TTGGTTTGGC TTATTTTGCT GAAATCCCTC TAGTGTTGAT GAATGTGCAA
CGGGCTGGGC CTTCAACGGG GATGCCTACT CGAACTCAGC AATCGGACAT GTTGACCTGT
GCTTATGCCT CTCATGGTGA CAGCAAGCAG GTATTGTTAA TCCCATCAAC TCCAAAGGAG
TGTTTTGATT TTAGTGCTCA GGCATTTGAT CTGGCCGATA GGCTACAGAC ACCGATCATT
GTGATGACAG ATCTCGATAT GGGGATGAAT ATTCACTTGA GTGATCCCTT TGGCTGGGAT
GATAAGCATG AGTACGATCT GGGTAAAGTA TTGGATGCTG ACGACTTAGA GAAGGCGAGT
GACTTCGGTC GCTACTTAGA TGTTGATGGT GATGGCGTAT GTTATCGAAC ACTGCCGGGA
ACCCATCCGA ATAAAGGTGC TTTCTTTACC CGAGGCACCT CCCATAACGA GTATGCGGCT
TACACAGAAA AGGGGGAGGA TTACATCAAA AATATGGAGC GCTTAGAGCA TAAGTTTGCC
ATGGGCGTTA AGCGATTACC CGCCCCTGAA ATTACCATCA ATACCAAGGC TAAACGTGTT
GGGCTTGTTT ACTACGGCTC GACTGATGAG GCGATTCCTG AGGCGGTGAG TTTGCTCTGT
GAGCAGGGAG TGAAAGTCAA TACCTTAAGG ATTAGAGCTT TTCCCTTCAG CCCTCAAGTG
GCCAGTTTTA TCAGCGAACA TGACGGTGTG TTTGTGGTGG AGCAGAATCG AGATGGGCAG
GTTAAGAAGC TATTGTGTAA TGAGCTGACC ATTGACCCTG CCTCCATGTG CGCGGTATTG
CACTATGATG GCTTGGCTAT CACTGGACAA TTTATTGCTG AGTCAGTTCA AGCCCAGCTC
TCAGTTCAAA CCGATCAGGC TGCAGGATAA
|
|---|
| Protein sequence | MTLFQSINEF VVRFANTNGT GSASANNMFA KAIMRMGLPV SAKNIFPSNI QGMPTWFEVR
ISEKGFLGRR DGAPELVVAM NAQSIEEDIQ SVQPGGFLLY DSSRILPQRL MRKEINFLGM
PISDICRAEY SDPRQRQLFK NVIYVGALAA LLDIDFQVLK DLVSDQFKGK DKLIRPNIYA
LELGFEFANK QFSCPLPICV ERRDLIGDRI LVDGNTASGL GAVYGGATVV GWYPITPSTS
VIEKFASYCQ RLRIDPANGQ KNYAIVQAED ELSAIGIAMG GGWNGARAFT ATSGPGISLM
TEFLGLAYFA EIPLVLMNVQ RAGPSTGMPT RTQQSDMLTC AYASHGDSKQ VLLIPSTPKE
CFDFSAQAFD LADRLQTPII VMTDLDMGMN IHLSDPFGWD DKHEYDLGKV LDADDLEKAS
DFGRYLDVDG DGVCYRTLPG THPNKGAFFT RGTSHNEYAA YTEKGEDYIK NMERLEHKFA
MGVKRLPAPE ITINTKAKRV GLVYYGSTDE AIPEAVSLLC EQGVKVNTLR IRAFPFSPQV
ASFISEHDGV FVVEQNRDGQ VKKLLCNELT IDPASMCAVL HYDGLAITGQ FIAESVQAQL
SVQTDQAAG
|
|---|
| |