| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1132 |
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| Symbol | |
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| ID | 6115366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1455043 |
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| End bp | 1456179 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632615 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001759520 |
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| Protein GI | 170725494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCA CCTCAAGCGT CACCAATAAA CCAACAACAA AGACGCCAGG AAAAGTCCTG
CTTAAAATAG AGCGGGTCAG TAAGTTATTT GATGATGTTC GCGCTGTCGA TGATGTGTCG
CTAGACATCA ATCAAGGGGA GATTTTTGCA CTGCTGGGAG GCTCAGGTTC TGGCAAGTCT
ACCTTGCTGC GTATGCTGGC AGGTTTTGAG AAACCCTCTG AGGGACGTAT CTATCTCGAC
GGTGTCGATA TCACAGATAT GCCGCCACAC GAGCGACCGA TAAACATGAT GTTTCAATCC
TATGCGCTGT TTCCTCATAT GTCGGTTGAG CAGAATATCG CCTTCGGTTT AAAGCAAGAT
AAGTTACCTA AAGATGAGAT CGCCGCTCGC GTGGCTGAGA TGCTCAAACT GGTGCATATG
GAGGAGTACG CTAAGCGTAA ACCTGCTCAG TTATCTGGCG GTCAGCGTCA ACGTGTCGCA
TTGGCGCGCT CTTTAGCAAA GCGGCCAAAA TTACTGCTAC TCGATGAGCC TATGGGGGCT
CTGGATAAAA AACTGAGAAC TCAGATGCAG CTTGAGGTCG TCGATATTCT TGAGGCTGTC
GGCGTGACTT GCGTCATGGT GACCCATGAT CAGGAGGAGG CGATGACCAT GGCTGAGCGT
ATCTCCATTA TGAATGAGGG CTGGATAGCA CAGACTGGCT CGCCGATGGA TATCTATGAG
AGTCCTTCGT CACGAATGGT GGCTGAATTT ATTGGTTCTG TGAACCTCTT TGAGGGGGAG
ATAGTGGTTG ATGTGGCGGA TCACGCCATC ATACAGTCGC CCAATCTTGA AACTAAGTTC
TATATTGGTC ACGGGGTATC GACCAATGTG GAAGATAAGA CAGTTTGGTT AGCAGTGAGA
CCTGAGAAAG CGCGTATTAG TCGTGAACAG CCAGAGAATG AATACAACTG GTGCCAAGGC
GTGGTTGAAG ATATTGCCTA CCTTGGTGGG ATCTCAGTCT ATTACATTCG TCTGACTAAT
AATCAGGTGA TCCAATCTGT GATGACTAAC CGTGATAGAC GCTCAGATCC TCCTACATGG
GAAGATAAGG TCTTCATCAG TTGGGAGGCC ACCAGCGGAG TGGTCCTCAG ATCATAG
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| Protein sequence | MTTTSSVTNK PTTKTPGKVL LKIERVSKLF DDVRAVDDVS LDINQGEIFA LLGGSGSGKS
TLLRMLAGFE KPSEGRIYLD GVDITDMPPH ERPINMMFQS YALFPHMSVE QNIAFGLKQD
KLPKDEIAAR VAEMLKLVHM EEYAKRKPAQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVDILEAV GVTCVMVTHD QEEAMTMAER ISIMNEGWIA QTGSPMDIYE
SPSSRMVAEF IGSVNLFEGE IVVDVADHAI IQSPNLETKF YIGHGVSTNV EDKTVWLAVR
PEKARISREQ PENEYNWCQG VVEDIAYLGG ISVYYIRLTN NQVIQSVMTN RDRRSDPPTW
EDKVFISWEA TSGVVLRS
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