| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1126 |
|---|
| Symbol | |
|---|
| ID | 6115360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1447133 |
|---|
| End bp | 1448140 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641632609 |
|---|
| Product | peptidase S15 |
|---|
| Protein accession | YP_001759514 |
|---|
| Protein GI | 170725488 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGAT ATATATTGGT TTTTACTTTA GTTATTGCAT CATTTGGAGC CCAAGCATCC
AACTTAATCA ATGATGAACG AATCAAAAAA CAAACAGACT GCTTTAGTAA AATCTTTTCT
GATTATGATT CATGGCGTGG CTTTATAGAG AAAAAATACA GAAAAAGGGC AAAGTCTGAT
ACTAAGGTAG AACAAAAGTT GGCTCAATTT GACGTTATTT TTGGTAAAGA AAAATTTAAC
TATTTCAAAG ACAAGTTAGC TTGTAGAAAC TTCGAATACT CTGTTGATGG ACAAGCTGTT
TACGGTTATG TCATTAAGCC CAAATTAGCT AAGAATGACC TGCCAGTGTT AATTTATAAC
CGCGGTGGCA ACGGAGGATT TGGCGGAGTT GTTTTAGGCG CAATGATACA AAACCTATTT
CCTATTGCTG AGAAAGGGTT CGTTATTATC GGTAGCCAAT ACCGAGGTAC ATTTACAAAA
GATGACTCTC TTGATCAGTT CGGTGGCAAA GACGTCGATG ATGTTATTGC GCTGTTAGAC
TACATTCCAA GTATTGAAGG TGCAGATCAT AACCGTATTG GAATGTATGG GGCTAGCAGA
GGTGGAATGC AGACACACTT AGCGACCAAG CGAATCAAGA ATATAAAGGC TATTGCAACC
CTTGCTGGCC CATCTGATCT GTTAAAAGGG CTCACTTATA GACCCAAAAT GGAAAAAGTA
TTTAAGCACC GAATTCCTGA TTATGAGAAG AATAAGGTGT CTGAACTAGA GAAACGTTCA
GTACTGAGCT GGGTAGATGA GTTATCTGCA GATGTCCCTA TCTTGCTTCT TCATGGCACT
AATGACAAAA GAGTGTCAGT AAACCACTCC ATTGATCTTG CTGATGCCTT ATCAAAGCAC
AAGATCCCCC ATAAACTCGT GTTATACCCA GAAGATAATC ATGGCTTGAT GCAAAATAAA
GAGAAAGCCA ACATAGAACT CGTTAACTGG TTTAGAGAGT ATCTATAA
|
|---|
| Protein sequence | MNRYILVFTL VIASFGAQAS NLINDERIKK QTDCFSKIFS DYDSWRGFIE KKYRKRAKSD
TKVEQKLAQF DVIFGKEKFN YFKDKLACRN FEYSVDGQAV YGYVIKPKLA KNDLPVLIYN
RGGNGGFGGV VLGAMIQNLF PIAEKGFVII GSQYRGTFTK DDSLDQFGGK DVDDVIALLD
YIPSIEGADH NRIGMYGASR GGMQTHLATK RIKNIKAIAT LAGPSDLLKG LTYRPKMEKV
FKHRIPDYEK NKVSELEKRS VLSWVDELSA DVPILLLHGT NDKRVSVNHS IDLADALSKH
KIPHKLVLYP EDNHGLMQNK EKANIELVNW FREYL
|
|---|
| |