| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1123 |
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| Symbol | |
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| ID | 6115357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1443044 |
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| End bp | 1443955 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632606 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759511 |
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| Protein GI | 170725485 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTT TTTCGGCAAT ACCTGTGTTT GTCGCTGTGA TAGAGAGCGG CAGTTTTTCT
CAAGCAGCGT CACGCTTAGG GATCAGTAAG TCGGCGGTCA GTAAAAGAGT TCGCCAGCTT
GAGGATAAAC TTGGGGTTCA ATTGCTACAC CGAACAACTC GCCAGCTCAG TTTGACTGAG
GCGGGAGAGC GCTATTTTGA GTACGCACTG AAATCCTATA TTGCTGCTGC AGAAGGTGTT
GATTCGGTGA CTCAACTGCA GGGAAACCCT AAAGGTGAGC TTAAGGTGAA TAGCCCCATG
TCATTTGGCC GTTTGCATAT TGCGCCACTT GTGGCCGACT TTTTAGCCAA ATACCCAGAT
ATCACCCTGA ACATGGTGAT GGATGATAGG GTCGTTGATC TGGTTGAGGG GGGATTTGAT
CTGGCTATTC GTGCTGGAAG TTTGCAGGAC TCAACCCTGA TAGCTCGCCG TTTAGCGCCA
TGTCGCAGTG TGATATGCGC AGCGCCTGAG TACCTTAAAA AGTATGGAAC TCCATTAATT
CCGACAGACT TGAGCAGGCA TAACTGCATC AATTATGCCT ATTTTAGTGG TGGCAGTGAA
TGGACCTTCC ATATGGATAC GGGTCCGCTC AAAGTGAAGG TCAGTGGTAA CTATCGGGTG
AATAACAGTG AAGCGCTGCA AAAGGCTATC CTATCTGGCT TAGGTATCGC TAAGATCCCC
ACATTTATCG TCGGCCAAGA TATTGCAGAG GGCAAGCTTG TTCCACTGTT AACCGACTAT
CAGCTGCCTA TGCAGACATT CTATGCTGTG TTTCCAGAGC GGCAACACCT ACCCGCCAAA
GTTAGGGTTT TTCTTGATTT TATTTTGGAA AGATTAGGTG GTGAGCAGCC CTATTGGGAT
AGAGGTTTTT AA
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| Protein sequence | MDTFSAIPVF VAVIESGSFS QAASRLGISK SAVSKRVRQL EDKLGVQLLH RTTRQLSLTE
AGERYFEYAL KSYIAAAEGV DSVTQLQGNP KGELKVNSPM SFGRLHIAPL VADFLAKYPD
ITLNMVMDDR VVDLVEGGFD LAIRAGSLQD STLIARRLAP CRSVICAAPE YLKKYGTPLI
PTDLSRHNCI NYAYFSGGSE WTFHMDTGPL KVKVSGNYRV NNSEALQKAI LSGLGIAKIP
TFIVGQDIAE GKLVPLLTDY QLPMQTFYAV FPERQHLPAK VRVFLDFILE RLGGEQPYWD
RGF
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