| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1114 |
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| Symbol | |
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| ID | 6115348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1431702 |
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| End bp | 1433039 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632597 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_001759502 |
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| Protein GI | 170725476 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00127194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TTCAGACAAG TAAGCATAGT GAAACTCAAA CACTTGAAAA CTATTGGATG
CCCTTTACTG CCAATAGACA GTTCAAAGCG AGCCCAAGAA TGCTCGCAGA AGCTGAAGGT
ATGTATTACA AGGACACGTC TGGCCGCCCC GTTCTCGATG GTACAGCAGG ACTTTGGTGT
TGCAACGCTG GCCATGGTCG CAAAGAGATC TCTGAAGCCG TAAGCCATCA GATCCACCAA
ATGGATTACG CTCCCTCTTT TCAGATGGGA CACCCCCTTG CATTTGAACT TGCTGAACGC
TTAGCCAGTA TTAGTCCAGA AGGGCTAAAC AAGGTCTTCT TTACTAACTC AGGTTCAGAG
TCTGTCGACA GTGCTCTTAA GATTGCCATC AACTATCACA GAGCCAATGG TGAGTCGACT
CGTACTCGAT TTATCGGCCG CGAGCTTGGT TATCATGGCG TTGGCTTTGG CGGGATCTCA
GTCGGTGGCA TAGGTGGCAA TCGCAAAACC TTTAGCCAAC AACTACTGCC TGGCGTCGAC
CACCTTCCCC ACACATTAGA TATGCAAGAT AACGCCTTTA GCCGTGGCAT GCCTAAAACT
GGCGCCGAGA AAGCGGAGGT TCTTGAGCAA CTTGTCGCAC TTCATGGCGC CGAGAATATT
GCCGCCGTCA TCGTAGAGCC AATGTCCGGC TCAGCGGGCG TGATATTACC TCCTGAAGGT
TATCTGCAAC GCTTAAGAGA GATCACTAAG AAACATGGGA TCTTACTGAT TTTTGATGAG
GTTATCACAG GCTTTGGCCG TGTCGGTGAT GCGTTTGCCA GTCAACGCTG GGGAGTAACA
CCAGATATGA TCACAGCGGC AAAAGCCCTC AATAACGGGG CTATTCCCAT GGGCGCAGTG
CTGATTGACG ACAACATCTA TGATGCTTGT ATGCAGGGGC CAGCAGGTAT TGAACTGTTT
CATGGCTATA CCTATTCAGG TCATCCAGTT GCAGCAGCGG CGGCCATCGC CAGTTTAAAT
ATCTATGAAA ATGAGAAGCT ATTTGAGCGC ACAAAAGAGC TTGAAAGCTA CTTTGAAGAT
GCCATCCATA GCCTTAAAGG TCTGCCCAAT ATCATCGACA TTCGCAACAT AGGCTTAGTA
GGTGGAATTC AGTTCTCTCC CAGTGCACAA GGAGTGGGTA AACGCGGCTT CGCTATCTTC
GAAGAGTGTT TTGCCAAAGG CACGCTAGTG CGAGCCACTG CAGATATTAT CGCAATCTCG
CCTCCCCTTA TCGTGGATAA GCAGGAGATA GATCAGATAG TAAATACCTT AAGCGATGCG
ATCAGAGCCG TCGATTAA
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| Protein sequence | MTDIQTSKHS ETQTLENYWM PFTANRQFKA SPRMLAEAEG MYYKDTSGRP VLDGTAGLWC
CNAGHGRKEI SEAVSHQIHQ MDYAPSFQMG HPLAFELAER LASISPEGLN KVFFTNSGSE
SVDSALKIAI NYHRANGEST RTRFIGRELG YHGVGFGGIS VGGIGGNRKT FSQQLLPGVD
HLPHTLDMQD NAFSRGMPKT GAEKAEVLEQ LVALHGAENI AAVIVEPMSG SAGVILPPEG
YLQRLREITK KHGILLIFDE VITGFGRVGD AFASQRWGVT PDMITAAKAL NNGAIPMGAV
LIDDNIYDAC MQGPAGIELF HGYTYSGHPV AAAAAIASLN IYENEKLFER TKELESYFED
AIHSLKGLPN IIDIRNIGLV GGIQFSPSAQ GVGKRGFAIF EECFAKGTLV RATADIIAIS
PPLIVDKQEI DQIVNTLSDA IRAVD
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