Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1112 |
Symbol | |
ID | 6115346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1429661 |
End bp | 1430023 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632595 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001759500 |
Protein GI | 170725474 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0143177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATATTA ATAGCATTGT CGACATATCA AACAACAAGA CAGAGAGTGA ACATTACCAT TTAGATGACG AAAAGCTCAT CTCAGGTAAT CCTGCTCAAG CAGTAGAGAA TCACTTTTCA AGTCCTTGTG ACCAGTTTCA TTGCGGCGTT TGGGAAAGTG AAAAAGGCAG CTGGAAGGTC AACTATACCG AGAGCGAATA CTGCGAGATT TTAGCTGGCA GCAGCGTGAT AACCGACGAG AATGGCAACA CCATTACCGT GAATGAGGGA AGCCGCTTTG TGATCCCAGC TGGATTCTCT GGCACCTGGG AGGTGTTAGA TAGTTGCAAG AAGATCTATG TCATGTTTGA AGCACCCCCC TAA
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Protein sequence | MNINSIVDIS NNKTESEHYH LDDEKLISGN PAQAVENHFS SPCDQFHCGV WESEKGSWKV NYTESEYCEI LAGSSVITDE NGNTITVNEG SRFVIPAGFS GTWEVLDSCK KIYVMFEAPP
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