Gene Swoo_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1056 
Symbol 
ID6115290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1372127 
End bp1372738 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content45% 
IMG OID641632539 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001759444 
Protein GI170725418 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTTT CGCCCTCTAT TGAGCTCACC TTTGAGGAAA AATCTCAGTT ACTGAGACTT 
TCAAGGGACA CCTTGCAGCA ACACTTTGCC CCTCAAACAA ACCCAGCAGC TAGCACAGAC
TTAGTTCATG AGTTAGATCT TCGCGCCAGC TCAATACTAA ATAAAACCTT AGGCTGTTTC
GTCACCTTAA CTTTGCAAGG AGAGTTACGC GGCTGCATAG GCCATATTGA AACGCCACAA
AGACTCCATC AAACCATCCC CACATTAACA CTACGAAGTG CCCTTCATGA TCCCCGTTTC
TCACCTTTAA CAACAGAGCT GTTAGAGCTG ATCACCATAG AGCTTTCTAT ACTCTCGCCT
TTACGCTCTT TAACGGTCAA CTGCAGAGAA GATCTGCACC ATTACTTAGC ACAAAACAGA
GTCGGTATCG TACTCACTGA AGACAATAAA CGAGGCGTAT TCTTGCCACA AGTTTGGCAA
AAAATGCCCA CCCCTAAACA TTTTATAGAC GCCCTGCTTA TTAAGGGACA TTGGCCGAAA
AACTACTGGT CCGAAAAGAT AAAAATTGCC CAGTTCAGTG TCTGTCACTT CGGTGGAAAT
AGCGAGCTGT GA
 
Protein sequence
MPVSPSIELT FEEKSQLLRL SRDTLQQHFA PQTNPAASTD LVHELDLRAS SILNKTLGCF 
VTLTLQGELR GCIGHIETPQ RLHQTIPTLT LRSALHDPRF SPLTTELLEL ITIELSILSP
LRSLTVNCRE DLHHYLAQNR VGIVLTEDNK RGVFLPQVWQ KMPTPKHFID ALLIKGHWPK
NYWSEKIKIA QFSVCHFGGN SEL