| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1052 |
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| Symbol | |
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| ID | 6115286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1364610 |
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| End bp | 1366142 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632535 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001759440 |
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| Protein GI | 170725414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT CCAAAGACGC TTACGCGGAT AACGATCTGC GGGAAGTGAA GCAGTTAGGC
ATGTGGGCCT CGATTGCGAG CTTAAGTTAT ATTTTTTGGA TTGTAGGCGG AATGGAGCTC
GTTGAGCGTA TCGCCTATTA CGGAGTAAAA GCCAGTGCAG GCCTCTATGC AAAAGCCCCT
GTTTCTGAGG GTGGACTCGG CATCAGCCTT AGCGATTACG GTGTCATTAT CGCCATCTGG
GCATTTATGC AGACATTTAT CCCCGTTTTC ACTGGCGGGA TTTCAGATCG CGTAGGCTAT
AAAGAGACCA TTTTCGCTTC AACTATCATC AAGATTGCCG GCTACCTCAT GATGGCCTTC
TTCCCTAGCT TCTATGGTTT CCTGTTTGGC GCCATATTGC TTGCTGCCGG TACAGGTATA
TTTAAACCTG GGATTCAGGG TACGCTAGTT CTCTCTACAG GCAGACAAAA CACCTCCATG
GCCTGGGGGA TTTTCTATCA AGTGGTTAAT ATTGGCGGAT TCTTAGGTCC GCTTGTTGCC
GTACATATGC GTCAGCTCTC ATGGGACAAT GTGTTTTACG CCTGCGCCGC GATTATCTCC
CTTAACTTCC TTTTTCTACT CGCTTATAAG GAGCCTGGAA AAGAGGAGCG TTTAGAGCGT
AAACGTAAGA TTAAAGCGGG CGAGTTACAT CAAGAAGTAC TTTGGAAGGA TGCTTGGCAC
GAGCTGAAAA AACCTATCGT CATCTATTAC ATGTTGGTTT TTGCTGGTTT CTGGTTCCTG
TTTAACTCTC TGTTTGACGT ACTGCCAATC CATATTGCAG AGTGGGTCGA TACTAGCGTA
ATCGTCACCT CATTATTTGG TCCTGAAGGC ACATCAAACG GTATATTACA GTTCTGGCTT
GGACTGGATA ATACGGGAAC TAAGGTGATG CCTGAGGGCA TGCTCAACCT CAATGCGGGT
ATGATCATGA CCAGCTGTTT CTTGGTCGCA GCGCTAACGG CCAAATACCG CATAACCACA
GCCATGTTAG GTGGCTGTCT AATGAGTATC TTGGCTTTCG TGCTAATTGG TGCCACTAAT
GCAGCTTGGA TGATGGTGTT GGCCATCGCC ATGTTCTCGT TCGGTGAGAT GATGATCAGC
CCTAAAAAGA ATGAATTTAT GGGTAACATA GCACCTGAAG GTAAGAAAGC CATGTACCTA
GGGTTTGTCA TGCTACCACA AGGGATTGGC TGGACATTAG AGGGCTATTT TGGTCCGAAA
CTCTACGAGA TGTTTGCATC AAAAGAGATC TTCTCTCTTC AACTGCTAGC TGAGCGTGGC
ATGAATCAAT CCGAGATCGA TGCAATTCCT CAAGGTGAAG CCTTTACCAC TCTAGTCAGC
TATACAGGTG AGTCAGCTCA GTCTCTAACG ACCCTACTCT ACAACACACA TGATATCGGC
ATGGCTTGGT ATATTATCGC TGCGATCGGC ACCATCTCTG CCGTAGGTAT CTACCTCTAT
GGTAAGTGGC TACTTAAGCT GCAAAGAAGC TAA
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| Protein sequence | MSDSKDAYAD NDLREVKQLG MWASIASLSY IFWIVGGMEL VERIAYYGVK ASAGLYAKAP
VSEGGLGISL SDYGVIIAIW AFMQTFIPVF TGGISDRVGY KETIFASTII KIAGYLMMAF
FPSFYGFLFG AILLAAGTGI FKPGIQGTLV LSTGRQNTSM AWGIFYQVVN IGGFLGPLVA
VHMRQLSWDN VFYACAAIIS LNFLFLLAYK EPGKEERLER KRKIKAGELH QEVLWKDAWH
ELKKPIVIYY MLVFAGFWFL FNSLFDVLPI HIAEWVDTSV IVTSLFGPEG TSNGILQFWL
GLDNTGTKVM PEGMLNLNAG MIMTSCFLVA ALTAKYRITT AMLGGCLMSI LAFVLIGATN
AAWMMVLAIA MFSFGEMMIS PKKNEFMGNI APEGKKAMYL GFVMLPQGIG WTLEGYFGPK
LYEMFASKEI FSLQLLAERG MNQSEIDAIP QGEAFTTLVS YTGESAQSLT TLLYNTHDIG
MAWYIIAAIG TISAVGIYLY GKWLLKLQRS
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