Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1050 |
Symbol | |
ID | 6115284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1361636 |
End bp | 1362247 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632533 |
Product | GPR1/FUN34/yaaH family protein |
Protein accession | YP_001759438 |
Protein GI | 170725412 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACTA AGCTAGCTAA CCCAGCGCCA TTAGGGCTGA TGGGTTTCGG TATGACCACC ATACTGTTAA ATATCCATAA TGCGGGTTTT TTCCCGATTG ATTCTATGAT TTTAGCCATG GGTATATTTT ACGGTGGTTT AGGCCAAGTG ATCGTTGGCT GTATGTGTTT CAAGCGTGGT GATACATTTG GTACCACAGC TTTCACCTCT TATGGATTAT TTTGGTTAAC TTTAGTTGGC TTATTGGTTA TGCCAAAGAT GGGTCTAACC GAAGCAAGCC CTGCAGGCTT TATGGGTTGG TACCTAACTA TGTGGGGTAT CTTTACTGCA TTTATGTTCG TAGGTTCTTT ACGTTATCCA CGTGCTAAGC AGGTTGTCTT TGGCTCTCTT ACCGTTTTAT TCTTCCTATT AGCAGCAAGA GATTTCACCG GTAGTGCTCT GATTGGTACT ATTGCTGGCT TTGAAGGCAT ACTCTGTGGT GCAAGTGCTA TTTATTTTGC AATGGCACAA GTGTTAAATG CTGAGTATGG CCGTACTATT TTGCCAATTG GTGAGCTTGC TGTAGAAGAG AGCAAAACAG TTCAAATAGA GACTCAATTA AAAGCTGCTT AA
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Protein sequence | MSTKLANPAP LGLMGFGMTT ILLNIHNAGF FPIDSMILAM GIFYGGLGQV IVGCMCFKRG DTFGTTAFTS YGLFWLTLVG LLVMPKMGLT EASPAGFMGW YLTMWGIFTA FMFVGSLRYP RAKQVVFGSL TVLFFLLAAR DFTGSALIGT IAGFEGILCG ASAIYFAMAQ VLNAEYGRTI LPIGELAVEE SKTVQIETQL KAA
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