Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1037 |
Symbol | |
ID | 6115271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1348757 |
End bp | 1351138 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641632520 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001759425 |
Protein GI | 170725399 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGAAG ACTCATCGAT TAACCTTACC CCATTTCCTA TCATGGTCTG CAATAAAGAT GGATGCATCT TATATGTCAA TTCAAATTTC CAAAATGAGT TCGACATAGC CAATAGCAAG CTATCAGGTG CTTTGGCACA TACCTGCTTT CAAATCTTTA AAGACAGAGA TAACAACAGC CACTCTCAAT TTCAACAACA GCTTACCTCC CAATGTAATT TTTTCTCCTT CTTATCTCTT AATGGTAAGA ACATTTGCGT CAATGTCTCC ATTAATAAAA GCCCTCTTAA CCGTGATGAC TACTGGCTCA TTATTAGTAG ATGTCGGGAG TGCAGTGTAA AAAAATATAG AACAAACAAT AAACTAGATC GTATAAACCA TGCGATTAAG GGTGCGAGCA TTGGTCTTTG GGAATTAGAA CCTCTCCAAA ATCAAAGTTA TTTCTCCTCA ACCTTTAAAC AACTGCTCGG TCTTGGCTTA GAGTTCGAAC TCAACTGGTT TTCCTTTCTC AGTATGCTGC CACCACAAGA GCAAAATAAA CTTGATACTT TTCAAAATCA TAAACTGGAT ATTGGTGAGA GTTTTGATAT AGAGATCCAA ATGAAAGTTG GAGAGGATGA CAAGTGGTTC AAGCTCAATG GAGAGGTCAT TCTCAAACAG AATAATCACA CTAGTATTAC AGGCTCTCTT ATAGATTGTA CTCTAGAAAA AGCCCGCCTA CTGACACTAC AAAAAGCAAA CCTCGAGCTA AAATCGAGTG CTAAGCAGCG TTCTTTGGAA TTTAAAAGTG CTAAAGAGTT CGCCAAAAAA GCAAGCCAAA CTCAAAGTGA GTTTCTCTCA ATGATGAATC ATGAACTTCG TACTCCAATG AATGCTGTAA TAGGCTCACT CGATCTTCTC CGTCTAAGTA AACAATCATC TGAATCGATG GAGTTAATCG AAACGGCCAC TAGTTCAGCA ACCAATCTCA TGAATATTCT CAATGATATT CTGGATATCA ATAAGATTGA ATCAGGTAAA ATGCAACTAG AACATAGCCC CTTTTCCATT AATGAAACAA TCGACGGCTT AGTCAAAAGC TTCCTACCTA GCGCACAGAA AAAACAGATA CAACTCAATA TTAAAGAGAG CTCAATGGTA CCAAGCCAAG TTATAGGGGA TGAAAAAAAG ACTAGGCGAG TTCTATATAA TTTAATAAGC AATGCCATCA AGTTTACCGA TCTCAAGTGC ACACAGGGAA GAGTCAATCT AAACTGTGAA GTATCGCAAC AGAGTGAAGA GCTTCTCTAT ATAAAACTGA CTATCGAAGA TAACGGTATT GGGATAAATG AATCAGATCA AAGCAAATTA TTCGCACCAT TTACTCAAGC ACAAAAGTCG GTAACCAGAG AATATGGCGG CACGGGCCTA GGGCTGCCCA TCTGTAGAAG TCTCGTTCAA CAGATGGGGG GAAAGATAAC CCTGACAAGT AAAGAGGGGG TAGGATCTAC ATTCACTGTT GAACTGCCTT TTTCATTAAT AGAGACTGAA CAAGTCCAAC CAAAGCTCAA CACCTATAAC ATAGGAGTGA TCACTCAAGG CCAAAATCTA GAATTAGGTA AAACCATCAT TAAGCAGTTG GAGAGTGAAG GAGCCCGCGT TAAATCCGTT AATATAGAGG AGTTAGATAT AGCCCTTATC AACTATGATC TTTTATTGCT TATTCCTGAT TCATTGTCTA ATTCACAAAC TTTACTTCAG CAGCTTTACC AAAAACAGGA GCAAGCAAGA AAATTCTTGA TTGCTATTCC AAGAGGTGAA CTTCCTCAGG CTCGCAAACT CATCCCTCAC AAACATATAC TTCCAGTTGA ACCTATGACC AAGATTCAAC TCCTTGAGTC AGTAAAATCT GTCATTGAAG AGCAGGAACT AAATTTAGAT TTAGAGCTAG AACTTGGATT AAATGAGTTA ACTTTTGATG ACATCGAAAT TGACTTAAAG AGCAATCAAA TACCCACCAC CTTGGCTGAT ATTCTTGTTG TCGAAGATAA CCCCCTTAAC CAAAAATTAA TTGTAAAACA GCTCAGTAAG TTAGGTTATC AATGCGACCT TGCCGATGAT GGCATTGGTG GTATTGAGAA CTGGAAAAAT ATGGATTACA AGTTAATTTT AACCGATTGT CATATGCCAA ACCTTGACGG CTACAGTATG ACAAAGCAAA TCAGGGAATT AGAGGAGAAA AGTGATAAAA AGAAAGTGCC AATTATCGCC ATAACTGGTG CAGCGATGAG CGGCGATGCC GAACGCTGCT ACTCTATGGG TATGAACGAC TTTGTAAGTA AGCCTATTAT TTTAAAAGAT TTAAAGAAAG TTATGGATAT CTGGTACGAA AAAGCAACCT AA
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Protein sequence | MYEDSSINLT PFPIMVCNKD GCILYVNSNF QNEFDIANSK LSGALAHTCF QIFKDRDNNS HSQFQQQLTS QCNFFSFLSL NGKNICVNVS INKSPLNRDD YWLIISRCRE CSVKKYRTNN KLDRINHAIK GASIGLWELE PLQNQSYFSS TFKQLLGLGL EFELNWFSFL SMLPPQEQNK LDTFQNHKLD IGESFDIEIQ MKVGEDDKWF KLNGEVILKQ NNHTSITGSL IDCTLEKARL LTLQKANLEL KSSAKQRSLE FKSAKEFAKK ASQTQSEFLS MMNHELRTPM NAVIGSLDLL RLSKQSSESM ELIETATSSA TNLMNILNDI LDINKIESGK MQLEHSPFSI NETIDGLVKS FLPSAQKKQI QLNIKESSMV PSQVIGDEKK TRRVLYNLIS NAIKFTDLKC TQGRVNLNCE VSQQSEELLY IKLTIEDNGI GINESDQSKL FAPFTQAQKS VTREYGGTGL GLPICRSLVQ QMGGKITLTS KEGVGSTFTV ELPFSLIETE QVQPKLNTYN IGVITQGQNL ELGKTIIKQL ESEGARVKSV NIEELDIALI NYDLLLLIPD SLSNSQTLLQ QLYQKQEQAR KFLIAIPRGE LPQARKLIPH KHILPVEPMT KIQLLESVKS VIEEQELNLD LELELGLNEL TFDDIEIDLK SNQIPTTLAD ILVVEDNPLN QKLIVKQLSK LGYQCDLADD GIGGIENWKN MDYKLILTDC HMPNLDGYSM TKQIRELEEK SDKKKVPIIA ITGAAMSGDA ERCYSMGMND FVSKPIILKD LKKVMDIWYE KAT
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