| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1030 |
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| Symbol | |
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| ID | 6115264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1341081 |
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| End bp | 1341794 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632513 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001759418 |
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| Protein GI | 170725392 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000542446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.656047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGACC CTCAATCGAC CCATAGAGTC TTACTGGTAG AGGACGATAT TCGCCTTGCC
AACTTGATTG TGGATTATTT AAAGTCCCAT GGAATGCACG TTGAAGTTGA GCGTCGCGGT
GACACAGTGC TAACTCGCCT GATTAACTAT AAACCAGATA TTATACTGCT GGATATTATG
CTACCAGGAA TGGATGGACT CACATTATGT GAGAAATTAC CCGACTACTT TGCCGGCCCC
ATCTTATTGA TGAGTGCATT AGGTTCAAAC GAAGATCAGA TCAAAGGTTT AGAGCTAGGT
GCCGACGACT ATGTCGTTAA ACCTGTCGAT CCCGCTCTGC TTATCGCCAG AATTAATAAC
CTTTTACGCC GTACTGCTAA GCCGCCGAAA GTTGAATCTC ACTGCTTGTC ATTCGGTAAG
CTGAGCATAG ACCCTCACAC TCAGGCTATT AGACTTGGCG ACCTTGAAGT GGATCTAACC
AGTCATGAGT TTGAACTACT TTGGCTATTG GCATCTCAAG CAGGACAGGT ATTAAGCAGG
CAATATATCT ACCAATATCT GTTGAATATC GACTTCGATG GTAAAGACAG AAAGATAGAT
GTCAGAGTCT CAAGACTAAG AAAGAAGCTG GGCGACAACA TAGAAACCCC GTTCAGAATT
AAAACTGTTT GGGGCCAAGG TTACCTATTT GCACCAGAAG CTTGGACAAC CTAA
|
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| Protein sequence | MTDPQSTHRV LLVEDDIRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM
LPGMDGLTLC EKLPDYFAGP ILLMSALGSN EDQIKGLELG ADDYVVKPVD PALLIARINN
LLRRTAKPPK VESHCLSFGK LSIDPHTQAI RLGDLEVDLT SHEFELLWLL ASQAGQVLSR
QYIYQYLLNI DFDGKDRKID VRVSRLRKKL GDNIETPFRI KTVWGQGYLF APEAWTT
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