| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1025 |
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| Symbol | |
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| ID | 6115259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1335781 |
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| End bp | 1337250 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632508 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001759413 |
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| Protein GI | 170725387 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0837246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0386673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGATA TCAGAGATTT AACCTCTGTT TTAAGATCAA ATACCCCCAT TGTTGTCATT
GAAACTTATG AGGAGCACCG CGCCATTGAG TTGCTAAAAA AAGTATCGAG TGTGCTTTAT
CAGCCACTCT TTAGTTGGAG CATTACTCAA GGGCTAACTC GGGTTGATAG GGCGATGGGT
GTGCAGAAGT TTAACTGTGA GCCTGCCGAT ATCTTAGGTC AGATAAAGTC CACAGATCAG
CAGGGGATCT ATGTGTTATG TGACTTTCAT CCATTTGTAG AGAATGCCCC TAAAAATGTA
CGTCTGCTTA AAGAGATAGC TCTTGAGTAT GAGTCGCTCA AGCATACTCT TGTCTTGGTT
AGTCATGCAT TTGAGATCCC GCCGGAGATT AAGCGTTACT GTGCTCACTT TAGGTTATCT
CTGCCCAATG GAGCACAACT TCAGAACTTG ATCTATGAGC AAGTTGATAA GGTTAGGGCT
GAAGGTGTAA TGCTTGATGT CGATGACTCG GCAGTGCTTA AGCTTGCTGA AAACCTAAAA
GGTTTAACCT TTGACGATGC TCGTCGCCTA GCGCACAAAG CCATAGTTGA CGATGGTGCT
ATTACTCACT CAGATATCGA TATGGTTAAT AAGGGGAAAT TTGAACTGCT TGATATGGAA
GGTATACTGC AGTTTGAATA TGACACCAGT GACTTCTCCC AGGTGGCGGG TTTACATAAT
TTGAAGCAGT GGTTGAAACA CAGAACTCCT TCAACATGCA CTCAGAACCT TGAAGACCAA
CCAAAAGGTA TCCTATTACT TGGTGTACAG GGAAGCGGTA AGAGTTTAGC TGCTAAAGCG
GTTGCAGGGA TGTGGCAGAG ACCACTACTG CGACTGGATA TGTCGGCGCT CTATAATAAA
TACATAGGTG AAACAGAGAA GAACTTGCGT CATGCCTTAG AGCTTGCGGA TTTAATGTCT
CCCTGTGTGC TTTGGATTGA TGAGATAGAG AAAGGCTTGG GTGGTGGAAG TAGTGACGAT
GGTGTATCAA CGCGGATTTT AGGCACCATT TTGACTTGGA TGGCAGAGCG AAAGTCACAA
GTGTTTATGG TGGCGACAGC CAATGATATC TCGGCGCTGC CGCCAGAATT AATGCGTAAG
GGACGAATGG ATGAGATCTT CTTTGTAGAC CTGCCTGATG ATGAGATCCG CAAGGCTATC
TTTCTTATTC ATGCTAAACG TCGTGGTCTG GATCTGAGCA AATTTAATCT GGCTGAGCTT
TCCAATGCCA GTCAAGGCTT CTCCGGTGCA GAGATAGAGC AAGCGATAAT CTCCGCAATC
TATACTGCCA GAGCATCAGA GCTCACACTG GATCAGGGGC TGTTAATCGA TGAGCTAATG
AAAACAAGGC CGCTCTCGGT GGTGATGCGT GAAAAACTTG ATGCACTACG AAAGTGGGCA
TCAGGTAGAA CAGTCAATGC CCATAAGTAG
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| Protein sequence | MQDIRDLTSV LRSNTPIVVI ETYEEHRAIE LLKKVSSVLY QPLFSWSITQ GLTRVDRAMG
VQKFNCEPAD ILGQIKSTDQ QGIYVLCDFH PFVENAPKNV RLLKEIALEY ESLKHTLVLV
SHAFEIPPEI KRYCAHFRLS LPNGAQLQNL IYEQVDKVRA EGVMLDVDDS AVLKLAENLK
GLTFDDARRL AHKAIVDDGA ITHSDIDMVN KGKFELLDME GILQFEYDTS DFSQVAGLHN
LKQWLKHRTP STCTQNLEDQ PKGILLLGVQ GSGKSLAAKA VAGMWQRPLL RLDMSALYNK
YIGETEKNLR HALELADLMS PCVLWIDEIE KGLGGGSSDD GVSTRILGTI LTWMAERKSQ
VFMVATANDI SALPPELMRK GRMDEIFFVD LPDDEIRKAI FLIHAKRRGL DLSKFNLAEL
SNASQGFSGA EIEQAIISAI YTARASELTL DQGLLIDELM KTRPLSVVMR EKLDALRKWA
SGRTVNAHK
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