Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1022 |
Symbol | |
ID | 6115256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1332969 |
End bp | 1333931 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632505 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001759410 |
Protein GI | 170725384 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.014752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAG TGGTACTCGA CGGTCATACC CTTAACCCTG GAGATTTAAG CTGGTGTGGG CTCAGTGAAT TGGCTGATGA AGGAGAGTTT ATCTGTTATG AGAGGACCGC AGAGTCAGAG CTACTGAGTC GAGCCCAGGA TGCAGAGATA ATCTTCACCA ATAAGACGCC TCTTAATGCT CAGGTGCTTT CTCAACTGCC TAAGCTTACC TATATAGGTG TGTTGGCAAC GGGCACCAAT GTAGTTGATT TAGTCGCAGC TGCTAGCCAT GGCATGGTAG TGACCAATGT TCCCAGTTAT GCCCCTGACG CTGTGGCTCA AATGGTATTT GCCCATATTT TTCATCATAC ACAAGGCGTT GCCTCCCACC ATCAAGCGGT TGTTCAAGGG GCATGGAGTC AATGCCCAGA TTTTTGTTTT ACCCTAAGCC CACTGCAATC TTTGAAGGGA AAAACCATAG GTTTAATGGG CTATGGAGCC ATAGGTCAAC AGGTGGCCAA TATTGCACTG GCCTTCGGGA TGAAGGTATT AGTGAATACG AGAACGCCGC TACTCGACTT GCCGACGGGA GCCATCTGGA GTGAATTGAG CGACATGCTA CCTCAGGTGG ATATACTTTC GCTGCACTGC CCTTTGACGC TGGAAACGGA TAAGATAGTT AATCGGGCGC TACTCAAATC GATGCGCAAA ACCGCTATTT TAGTCAATAC TGCTCGTGGT GGATTAATCG ATGAAGTGGC TTTGAGTCAG GCACTAGCCG ATGGCGATAT CGCCGCTGCT GGATTGGATG TACTCTCAAC TGAGCCTCCT TTAGATAACA ACCCACTACT GAATGCTATC AATATCAGTA TTACTCCTCA TAACTCCTGG GCAACGCTGG AAGCAAGGCA AAACCTACTT AATATTGCTG TGAATAATTT GGCTGCCTTT TTGGCTGGTA AAGCAGATAA TCAAGTGAAT TAG
|
Protein sequence | MKIVVLDGHT LNPGDLSWCG LSELADEGEF ICYERTAESE LLSRAQDAEI IFTNKTPLNA QVLSQLPKLT YIGVLATGTN VVDLVAAASH GMVVTNVPSY APDAVAQMVF AHIFHHTQGV ASHHQAVVQG AWSQCPDFCF TLSPLQSLKG KTIGLMGYGA IGQQVANIAL AFGMKVLVNT RTPLLDLPTG AIWSELSDML PQVDILSLHC PLTLETDKIV NRALLKSMRK TAILVNTARG GLIDEVALSQ ALADGDIAAA GLDVLSTEPP LDNNPLLNAI NISITPHNSW ATLEARQNLL NIAVNNLAAF LAGKADNQVN
|
| |