Gene Swoo_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1021 
Symbol 
ID6115255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1332288 
End bp1332941 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content47% 
IMG OID641632504 
Producthypothetical protein 
Protein accessionYP_001759409 
Protein GI170725383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.570217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0129716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA TAAAAAAAGC AGGGAATATT CCCACCTCTA TGTTGGCAGT CGCTTCTCTT 
CTGCTTTCTG CTCCCTCTTT TGCTGAGGTC TATGTCGCTC CTTTCGGAGG ATATAGCTTT
GGTGCCAGTG AGTTTAATAT CAAGAGCTCA GGGGTCGGTA ACCTTGCGAG TGATGAAGAG
GGCGAACTCA AGGTCTCTGA GTCGGCGCAA TATGGCGTTA TGCTAGGTTT TACCACGACA
GATCCTGGTG ATATCTATCT ACTCTACAGC CATCAGTCTA CGGAGCTGAG AACTGGTAAT
AATTTTAGCC CCTCTCCTAT CACTGATCTG GATCTAGATT ATCTGCATCT GGGTGGCTCT
CTCTATTTCC CCAAGGGCGA TGTAAAGCCA TATGTTACGG CTAGTGTTGG TTTAACTAGT
ATGCGCCCAA GTGGTGAATA CGCCAACGAG ACTCGCTTTT CCATGGGGTT TGGCGTTGGA
GTTGCGTATC AAGTGGCTCC CTCATTCTCT GTTTTTGCTG ATGCCAGAGG TTATGCAACC
TTCATCAGTA GTGACTCGAC GCTATTTTGC AATGGGGGAG ACTGTCTCTG GTCCATCAGC
TCTGACATCA TGTGGCAGGG GCAGGTCAAT TTAGGTTTGA AATTGACGTT TTAG
 
Protein sequence
MPDIKKAGNI PTSMLAVASL LLSAPSFAEV YVAPFGGYSF GASEFNIKSS GVGNLASDEE 
GELKVSESAQ YGVMLGFTTT DPGDIYLLYS HQSTELRTGN NFSPSPITDL DLDYLHLGGS
LYFPKGDVKP YVTASVGLTS MRPSGEYANE TRFSMGFGVG VAYQVAPSFS VFADARGYAT
FISSDSTLFC NGGDCLWSIS SDIMWQGQVN LGLKLTF