Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1021 |
Symbol | |
ID | 6115255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1332288 |
End bp | 1332941 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632504 |
Product | hypothetical protein |
Protein accession | YP_001759409 |
Protein GI | 170725383 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.570217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0129716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGATA TAAAAAAAGC AGGGAATATT CCCACCTCTA TGTTGGCAGT CGCTTCTCTT CTGCTTTCTG CTCCCTCTTT TGCTGAGGTC TATGTCGCTC CTTTCGGAGG ATATAGCTTT GGTGCCAGTG AGTTTAATAT CAAGAGCTCA GGGGTCGGTA ACCTTGCGAG TGATGAAGAG GGCGAACTCA AGGTCTCTGA GTCGGCGCAA TATGGCGTTA TGCTAGGTTT TACCACGACA GATCCTGGTG ATATCTATCT ACTCTACAGC CATCAGTCTA CGGAGCTGAG AACTGGTAAT AATTTTAGCC CCTCTCCTAT CACTGATCTG GATCTAGATT ATCTGCATCT GGGTGGCTCT CTCTATTTCC CCAAGGGCGA TGTAAAGCCA TATGTTACGG CTAGTGTTGG TTTAACTAGT ATGCGCCCAA GTGGTGAATA CGCCAACGAG ACTCGCTTTT CCATGGGGTT TGGCGTTGGA GTTGCGTATC AAGTGGCTCC CTCATTCTCT GTTTTTGCTG ATGCCAGAGG TTATGCAACC TTCATCAGTA GTGACTCGAC GCTATTTTGC AATGGGGGAG ACTGTCTCTG GTCCATCAGC TCTGACATCA TGTGGCAGGG GCAGGTCAAT TTAGGTTTGA AATTGACGTT TTAG
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Protein sequence | MPDIKKAGNI PTSMLAVASL LLSAPSFAEV YVAPFGGYSF GASEFNIKSS GVGNLASDEE GELKVSESAQ YGVMLGFTTT DPGDIYLLYS HQSTELRTGN NFSPSPITDL DLDYLHLGGS LYFPKGDVKP YVTASVGLTS MRPSGEYANE TRFSMGFGVG VAYQVAPSFS VFADARGYAT FISSDSTLFC NGGDCLWSIS SDIMWQGQVN LGLKLTF
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