| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1017 |
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| Symbol | |
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| ID | 6115251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1327136 |
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| End bp | 1329457 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632500 |
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| Product | organic solvent tolerance protein |
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| Protein accession | YP_001759405 |
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| Protein GI | 170725379 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000878563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00955351 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGATCC GTTACTTATT GGCATTAAGC CTACTTCCCC AATTGGTCTT GGCTGAAGAA
ACCACCACGC CTGATGCAAA TATGCAGTGT ATTGTCGAGC CTCCAGTTCC TCGCCCTGCT
ATTTCAGACA GTGATGAAAC CGAGATAGCC CTACAGGAGA TCCAGATAAT CTCCAACCGC
TCAGAAGCTG AGATGGGCAA GCAAGCTAGG TTTAATGGCG ATGTGTCATT TAGCCAAGGT
GGCCGTCATA TTGCGGCAGA TGAAGCGATT TTAGATCAGG GTGAAGAGCG ACTCGATGCC
AATGGCAATC TCGTCTTCCA AGATCAAATG ATCACCATCA CTGCTGACTC TCTCGTCGCT
GAGATGCGTA ACAATAGTGC ATCCCTTTGG GGTGCACAGT ATTGGCTGCA CGGGCAGCAG
ATCCATGGTG ATGCAGAAAA GTTAGAGATC ACCCCAGACA ACAACCTGCA CCTAACAAAA
ACCAATTTTA CCACTTGCCC TCCCGGCGAT ACCTCCTGGC TACTTGAAGC TGAAACGATC
AAAATTGATA GCACTGAGGA GTGGGGAGAG TTATGGGATG CAAAGTTACG GATCGGTGAT
GTCCCCGTAT TCTATATTCC TTATATGACA ATACCGGTAT CCGATAAACG TAAATCAGGT
TTCCTTTTTC CACTTTTAAG CACCAGCACC ACCAATGGTG TCGAGGTCGC AACGCCTTAC
TACTGGAATA TATCGCCGGA GTACGATCTC ACCCTAACGC CACACTATAT GTCATCGAGG
GGATTATTCC TTAAGAGTGA TTTTCGCTAT TTGGCGGGTG ATGCTCAACA GGGTCAGATT
AATGTCGAAT ATCTCGGCAA TGATGATATG TTATCGGACT CACAAGATCG CTACCTCTAT
CACTGGGAAC ACAGAGGCGC GATTAATGAA AACTGGCGAG TATTAGCCAA CTTCACCGAT
GTGTCAGATA ACAACTATTT CAACGATCTT AAATCAGAAG TTCAGCGAGC CACTGATAAC
CAGATGTCAC GAATTGGTGA GATCAGTTAT TTTGAACAAA ATTGGGACTT CACCGCACGA
GTACAAGATA TTAAAGTGCT GGGTGAAGAG GAGAAACCCT ATCAGGTAAT GCCGCAAGTA
GGGCTAAATT ACCGCGCCCC AGACTTTTGG AACGGTTTAG ATTTCTCCTT ACTCAGTGAA
GTTAGTAATT TTGAACATGA TGATAATGAG TACTCCACCG CCACTCGTTT ACACATTGAG
CCTACCGTCT CATACCCAAT ACATGGCCCA GCAGGTTCTT TAACCAGTGA AGTAAAGTTG
CTTCAAACCT ATTATTGGCA AAACGATAAT GGATTTGAGG CTAATCAAGA GCTGGCCAGC
AGCGTAAGTC GAACCTTACC TCAGGTACGT CTACATGGTC AGATCAACTT TGAGCGCTTC
ACCAGTTATT TTAATGAGAA CTACCGTCAG ACCTTAGAGC CTCAGTTCCA ATACCTTTAT
GTAGGCTATG AAGATCAAGA TGACATAGGT ATCTATGATA CAGCTAAGAT ACAGGAAGAC
TACTTTGGTC TGTTCCGCGA CCGACGCTTT TCCGGTATTG ACAGAATTGC CGATGCTAAC
CAGTTCACTT TAGGATTGAC CACTCGCTTA TTCGATGATC ATAACGTTGA AACATTTAGA
TTTAGCCTAG GTCAAATCTA TTACTTAGAA GACAGTAAAG TTGGGATTAG CGATCCAATT
AATCCCATCA ATAACTTAAC TCAGGAGAAC ACCTCCAACT CAGTATTGGC TGCGGAGCTT
AGTACTAAGT TATACAAAGA CTGGTATATG AGTGGCGCTA TTCAGTATGA TACTAAGCAA
AGTGATAATA AGAAGAGTGA AGTCACACTC GACTTTAGGC CAGGTGCCAA CAAATTACTT
CAATTTAGCT ATCGCTATGT CCCAGATCTG TTGAATACCA ATACCAATGA GTCAGTCAAT
ATCTCTCAAA CAGGTATGCG AGCCGCTTGG CCAATCAACG ACAATTGGTA CTTAGTGGGT
AACTGGTATT ATGATCTTAA CGAAAGTCGC AGTGTAGAGA CCTATACAGG CTTTCAATAC
GAATCTTGTT GCTGGGCTGT ACGTTTAAGT TATCATTACC GAATTAAAAC TAATTACGAA
GATGACTTTA ACCCAGTTCA GGATAACCGC GAACTCTTTG AAAGCGGTCT ATATCTGAAT
TTCGTAATAA AAGGACTCGG TGGTTCAGGT CCGTTAGGCG TATCAGATAT GCTTAACGAT
GGTTTGTTCA ATTACCGTAA ACCACTTTAT TTGAAGAACT AG
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| Protein sequence | MQIRYLLALS LLPQLVLAEE TTTPDANMQC IVEPPVPRPA ISDSDETEIA LQEIQIISNR
SEAEMGKQAR FNGDVSFSQG GRHIAADEAI LDQGEERLDA NGNLVFQDQM ITITADSLVA
EMRNNSASLW GAQYWLHGQQ IHGDAEKLEI TPDNNLHLTK TNFTTCPPGD TSWLLEAETI
KIDSTEEWGE LWDAKLRIGD VPVFYIPYMT IPVSDKRKSG FLFPLLSTST TNGVEVATPY
YWNISPEYDL TLTPHYMSSR GLFLKSDFRY LAGDAQQGQI NVEYLGNDDM LSDSQDRYLY
HWEHRGAINE NWRVLANFTD VSDNNYFNDL KSEVQRATDN QMSRIGEISY FEQNWDFTAR
VQDIKVLGEE EKPYQVMPQV GLNYRAPDFW NGLDFSLLSE VSNFEHDDNE YSTATRLHIE
PTVSYPIHGP AGSLTSEVKL LQTYYWQNDN GFEANQELAS SVSRTLPQVR LHGQINFERF
TSYFNENYRQ TLEPQFQYLY VGYEDQDDIG IYDTAKIQED YFGLFRDRRF SGIDRIADAN
QFTLGLTTRL FDDHNVETFR FSLGQIYYLE DSKVGISDPI NPINNLTQEN TSNSVLAAEL
STKLYKDWYM SGAIQYDTKQ SDNKKSEVTL DFRPGANKLL QFSYRYVPDL LNTNTNESVN
ISQTGMRAAW PINDNWYLVG NWYYDLNESR SVETYTGFQY ESCCWAVRLS YHYRIKTNYE
DDFNPVQDNR ELFESGLYLN FVIKGLGGSG PLGVSDMLND GLFNYRKPLY LKN
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