Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1016 |
Symbol | |
ID | 6115250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1325682 |
End bp | 1326986 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632499 |
Product | SurA domain-containing protein |
Protein accession | YP_001759404 |
Protein GI | 170725378 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000539949 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00270369 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACCGT GTAAACATTT AATTTTTGCT TTTCTTGCTT TGGCTGCGAG CCACACAGTA CAAGCGCAAA CTGCCCCACT CGATCGTGTA TCAGTACAGA TTAACGAAGG TATTCTGCTA GAGAGTGAAA TCACTGGCAT GATAAAAACC GTTAAAGCGA ATGCAACAGC AGCAGGTCAA GCGTTACCTT CTGATAGTGC ACTGAGAACA CAGGTCATTG AGCGCTTAAT TATGACCCGT CTGCAGATGC AGATGGCCGA CAGAATTGGT CTTCATATTG GCGATCTACA ACTGGATCAG ACCATAGGCA ATATTGCTAA AGAGCAAAAC TTAACTGTTG ATCAGATGCA GCTAAAGATT GCCGAAGAGG GGATGAGCTG GAACCAATAC CGTGAACAAC TACGTGAAGA GATCACCTTA GGTGAGATAC AACGTATTCA AGTTCAGCGT CGTATCCAAG TCTCTCCACA AGAGATCAAC AGCTTAGTTA AGATGATTGA GGAGAAAGGC CTTCAAGAAG TTGAGTTCCA GATTGGTCAC ATCCTTATCG AGGTACCAAG CAGCCCTAAC AGTGAACAAC TCGCTAGCGC CAGTAAACGT GCGGAAACCG TACTGAAACG CGTTAAAGAT GGTGCAGACT TCCGCCGCAC GGCCATTGCA GCATCATCGG GCCCCAAAGC ACTAGAAGGT GGTGTTTGGG ATTATATGAA CGTCAATGAG ATGCCAACGC TATTTGCTGA AGTATTAGGC AATGCCAAAC CAGGTGACGT GATAGGCCCT ATCAGAAGTG GCGCAGGTTT CCACATCATC AAAGTCTTAG ACGCCCGTGG TCTCCAGACC AAAGAGATAG ATGAAGTACG TTCAAGACAT ATCTTGATCA AGCCCTCACC TATCCTATCG GAAGAGCGCG CTAAAGCCAT GCTAGATAAA TTTGTTAAAG AGATCCGCAC CGGCGATGCA GACTTCGCAG CACTGGCTCG CCAATACTCT GAAGATCCAG GTTCAGGAGC AAAAGGTGGG GAACTAGGCT GGGCAGACCC AAGCGTCTAT GTTCCTGCAT TCGCACAAAC ATTAAATGCA CTTGAGCTTA ATGAGATCAG TGAGCCCTTC CGTTCAAGTC ACGGTTGGCA TATAGTGCAA CTTGAAGAGC GCCGTAAAAC GGACGCAACC GATAAGTTTA ATACGAATAG AGCACATCAG CTCATCTTCC GTCGTAAGTT TAATGAAGAG CTACAGAACT GGCTTGACGA GATGAGATCT GAAGCCTACA TCGAGGTTTT CGAACCAGAC AATAACCGAG GTTAA
|
Protein sequence | MKPCKHLIFA FLALAASHTV QAQTAPLDRV SVQINEGILL ESEITGMIKT VKANATAAGQ ALPSDSALRT QVIERLIMTR LQMQMADRIG LHIGDLQLDQ TIGNIAKEQN LTVDQMQLKI AEEGMSWNQY REQLREEITL GEIQRIQVQR RIQVSPQEIN SLVKMIEEKG LQEVEFQIGH ILIEVPSSPN SEQLASASKR AETVLKRVKD GADFRRTAIA ASSGPKALEG GVWDYMNVNE MPTLFAEVLG NAKPGDVIGP IRSGAGFHII KVLDARGLQT KEIDEVRSRH ILIKPSPILS EERAKAMLDK FVKEIRTGDA DFAALARQYS EDPGSGAKGG ELGWADPSVY VPAFAQTLNA LELNEISEPF RSSHGWHIVQ LEERRKTDAT DKFNTNRAHQ LIFRRKFNEE LQNWLDEMRS EAYIEVFEPD NNRG
|
| |