| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1015 |
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| Symbol | pdxA |
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| ID | 6115249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1324616 |
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| End bp | 1325602 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632498 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001759403 |
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| Protein GI | 170725377 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0112973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000614072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACGACTA AACGAATAGC CATCACCCCA GGCGAACCCG CTGGGATTGG TCCAGATTTA
GTTATCCAAC TCGCTCAGCA GGCTTGGCCT GCTGAGCTTG TTGTTTGTGC GGATCCTGAA
CTTTTAGCTT CCAGAGCTAA AATGCTTGGC CTTCCGCTGC AACTTAAACC ATACCAACCT
AGCCTTGAGC CGAAAGCCCA AGAGGCTGGC ACCCTGACGC TTGCGCCCTT TTCTCTCAAA
ACGGAAGCCC AATGCGGCAA ACTGGATGAG CAGAACAGTG CCTATGTAGT ACAAACTCTT
GGCTATGCTG GCGAAAAGAA TATGAACGGT GAGTTTGATG CCGTAGTTAC AGGGCCAGTC
CATAAAGGGA TCATCAACCA ATCTGGTATC CCCTTTAGCG GACATACTGA GTTTTTTGCC
AATCAGGCAA ACTGCCAAGA TGTGGTCATG ATGCTAGCAG CGCCTGGTTT ACAGGTTGCA
TTAGTCACAA CCCATATCCC TTTGGCCTAT GTATCTAAAG CCATAACTCG GGATCGCCTG
CATCAGATAA TCAAGATCTT ACACACTGAT CTTGTCACAA AATTTGCCAT CAAACAGCCC
AAGATATATG TATGTGGCCT CAACCCACAT GCAGGCGAAG ATGGACACTT AGGTCGGGAA
GAGATAGACA CCATTATCCC GGCTTTAGAG GAGTTGCGTG CTGAAGGTAT AAGCCTAGTA
GGCCCACTAC CCGCCGACAC CATATTCCAA AGCAAGTACT TAAATGACGC AGATGTCATA
CTGGCGATGT ATCATGATCA AGGACTCCCT GTTCTTAAGT CTCAAGGATT TGGCAGCTCA
GTGAACATCA CATTGGGCCT TCCTTATATC CGTACTTCAG TGGATCACGG TACAGCCCTT
GAACTCGCCG GAACCGGTAA AGCAGACATA GGTAGTTTTG TCTGCGCACT AAATAAAGCC
ATAGATTTGG CAGCAAAAGC TGAGTAG
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| Protein sequence | MTTKRIAITP GEPAGIGPDL VIQLAQQAWP AELVVCADPE LLASRAKMLG LPLQLKPYQP
SLEPKAQEAG TLTLAPFSLK TEAQCGKLDE QNSAYVVQTL GYAGEKNMNG EFDAVVTGPV
HKGIINQSGI PFSGHTEFFA NQANCQDVVM MLAAPGLQVA LVTTHIPLAY VSKAITRDRL
HQIIKILHTD LVTKFAIKQP KIYVCGLNPH AGEDGHLGRE EIDTIIPALE ELRAEGISLV
GPLPADTIFQ SKYLNDADVI LAMYHDQGLP VLKSQGFGSS VNITLGLPYI RTSVDHGTAL
ELAGTGKADI GSFVCALNKA IDLAAKAE
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