Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1006 |
Symbol | obgE |
ID | 6115240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1316654 |
End bp | 1317823 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632489 |
Product | GTPase ObgE |
Protein accession | YP_001759394 |
Protein GI | 170725368 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000134861 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000589779 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGTTTG TCGATGAAGC TGTGATCAGA GTCGAAGCTG GTGATGGTGG TAGTGGTTGC GTCAGTTTTA GACGTGAGAA ATATGTACCC GATGGTGGCC CAGATGGCGG CGACGGTGGT GACGGTGGCA GTGTATATCT GCAAGCCGAT GAGAGTTATA ACACCCTTAT CGACTTTCAA TTTGAACGTT TTCATCGTGC AGAGCGTGGC AAAAATGGCC GCGGTCGTGA CTGTACTGGA CACGGTGGCG AAGATCTAAT TCTTACAGTG CCTGTTGGTA CCCGTGCTAT CGATGAAGAG ACGCAAGAGT CTCTAGGTGA TTTGACCAAA CATGGTCAAA GAATGTTAGT TGCCAAAGGC GGCTTTCACG GATTAGGCAA CACGCGCTTT AAGAGCAGTA CTAACCGTGC ACCTAGACAG AAGACTTTAG GGACACCAGG TGAAGTACGC AGCTTAAAAC TTGAGTTAAT GCTGCTTGCT GATGTGGGTC TTTTAGGCAT GCCTAATGCG GGTAAGTCTA CCTTTATTCG TTCTGTTTCA AGAGCCAAGC CAAAGGTTGC CGATTACCCA TTTACTACAT TAGTGCCTAA CCTTGGTGTT GTTAACCCAA GACATGGTCA AAGCTTTGTT ATTGCTGATA TTCCAGGTCT GATTGAAGGT GCTGCAGATG GTGCAGGACT GGGTGTTCAG TTCCTAAAGC ACCTTGAACG TTGTCGCGTA TTACTGCATA TCTTAGATAT CGATCCTATT GATGGCTCTG ATCCGGTAGA GTCGGCTCGT GCGATTGTTG CTGAGCTTGA AAAACACTCA CCTAAGCTTG CAAGCAAGCC TCGCTGGTTA GTGATTAACA AGACCGATCT TATGCTTGAA GATGAGCTTA AAGAGCGCGT AGAAAATATC GTTAAAGAGC TTGAGTGGGA AGGCGATGTT TACACTATTT CAGCCTATAA CCGCGAAGGT ACGGAAGCAT TAAGTCTTAA GCTTATTGAT TTTATTGAGG CTCTACCACC AGAGGAAGAG ATAGATAAAG AAGCTGAAGT TGAGTTCAAG TGGGATAACT ACCATGAGAA TGCAAACGAG TCATTAAATG AAAATTTTGA AGATGATTTT GATGACGATG ATGACTTCGA CGATGATGAT TACGACGTAA AAGTGATCTA TCAAAGGTAA
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Protein sequence | MKFVDEAVIR VEAGDGGSGC VSFRREKYVP DGGPDGGDGG DGGSVYLQAD ESYNTLIDFQ FERFHRAERG KNGRGRDCTG HGGEDLILTV PVGTRAIDEE TQESLGDLTK HGQRMLVAKG GFHGLGNTRF KSSTNRAPRQ KTLGTPGEVR SLKLELMLLA DVGLLGMPNA GKSTFIRSVS RAKPKVADYP FTTLVPNLGV VNPRHGQSFV IADIPGLIEG AADGAGLGVQ FLKHLERCRV LLHILDIDPI DGSDPVESAR AIVAELEKHS PKLASKPRWL VINKTDLMLE DELKERVENI VKELEWEGDV YTISAYNREG TEALSLKLID FIEALPPEEE IDKEAEVEFK WDNYHENANE SLNENFEDDF DDDDDFDDDD YDVKVIYQR
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