| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1002 |
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| Symbol | |
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| ID | 6115236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1313545 |
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| End bp | 1314480 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632485 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001759390 |
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| Protein GI | 170725364 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000312167 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000277575 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG CTGTACTTGG TGCCGCAGGT GGTATTGGAC AAGCTCTTGC CCTACTACTT
AAAACACAAT TGCCTGCCGA TTCTAAACTA TCACTATATG ATATTGCTCC TGTAACACCT
GGTGTTGCCG TTGACCTTAG TCATATCCCG ACAGCTGTAG AAGTTAAAGG TTTTGCAGGC
CAAGATCCTT CGCCTGCACT TGAAGGTGCT GATGTTGTTC TTATCTCAGC GGGTGTTGCT
CGTAAGCCTG GAATGGATCG CTCAGATCTA TTTAACATCA ACGCAGGTAT CGTTAGAAAC
CTAGTTGAAA AATGTGCTGC AACTTGCCCT AAAGCACTTA TCGGTATTAT CACTAACCCA
GTAAACACAA CAGTTGCTAT TGCTGCTGAA GTGTTGAAAG CGGCAGGTGT ATACGATAAA
AATCGTTTAT TTGGTGTGAC AACTTTAGAT GTGATCCGCT CTGAAACTTT TGTTGCTGAA
GCAAAAGGTC TTAACGTTGC CGATGTGAAT GTCAATGTTA TTGGTGGTCA CAGTGGTGTG
ACGATTCTTC CACTTCTTTC TCAAATTGAA GGCGTGAGCT TTAGTGATGA AGAGGTTGCT
GCATTAACAA CTCGTATCCA AAATGCTGGT ACTGAAGTTG TTGAAGCTAA AGCTGGCGGC
GGCAGTGCAA CACTTTCAAT GGGTCAAGCG GCTTGTCGTT TTGGTCTGTC ACTTGTACGT
GGTCTTCAAG GCGAAGCCAA CGTTGTTGAG TGTGCTTATG TCGATGGTGG CAGTGAGCAT
GCAGAGTTCT TCGCACAACC AATACTACTT GGTAAAAATG GCGTAGAGAA AGTACTAGCC
TATGGTGATG TGAGTGAGTT TGAAGCAAAC GCACGCGATG CCATGTTAGA TACACTTAAT
GCTGACATCA AACTAGGTGT TGAGTTCGTT AAGTAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPADSKL SLYDIAPVTP GVAVDLSHIP TAVEVKGFAG
QDPSPALEGA DVVLISAGVA RKPGMDRSDL FNINAGIVRN LVEKCAATCP KALIGIITNP
VNTTVAIAAE VLKAAGVYDK NRLFGVTTLD VIRSETFVAE AKGLNVADVN VNVIGGHSGV
TILPLLSQIE GVSFSDEEVA ALTTRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGLSLVR
GLQGEANVVE CAYVDGGSEH AEFFAQPILL GKNGVEKVLA YGDVSEFEAN ARDAMLDTLN
ADIKLGVEFV K
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