Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0996 |
Symbol | |
ID | 6115230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1305619 |
End bp | 1306626 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641632479 |
Product | extracellular solute-binding protein |
Protein accession | YP_001759384 |
Protein GI | 170725358 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000369263 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAA TAAAAAATCT GGCAGTTCTA GGCTTAGTGT GTTTTGCCTC TGTTGCCAAT GCCGCAGATA AATTAACTGT TTACTCCTAC CGACAAGCTT TTTTAATCGA TCCAATCTTA AATGACTTTA CCAAAGAGAC GGGGATCGAT GTTGATGTGG TCTTTTCCAA AAAAGGGATT GCAGAAAGAA TGATGCGTGA AGGGAGACTT TCGCCTGCCG ATGTGGTGCT TACATCAGAC TTTTATCGCC TAATGGAGTT AGTAGATAAA GAGCTCGTGG TTCCAGCTTC CAGTGAACTG TTAAACAGCA ATATTCCAGC TCAGTATCGC TCTCCTGATG AAACCTGGTA TGCATTAACA ATGCGAGTGC GCAATATCTA CTCCTCTAAA GAGCGTCTAG GTAAGCTCAA TATTAATTAT GAAGATCTGG CAGATCCCAA ATACAAAGGA AAAATCTGTA CTCGAAGTGG TAAGCACCCT TATAACATCT CTTTGGTTGC TTCTATGATT GCCCATCACG GTGAGGCAGA AACTAAAGCT TGGTTGACTG GATTAAAAGC AAACTTAGCC CGTAAGCCTC AGGGAAATGA TCGCGCTCAG GTTAAAGCGG TTAAAGAGGG ACTTTGTGAT CTAGCCATAG GGAATAGCTA TTATCTAGGT AAGATGTTGC AAGATCCTAA ACAGGTACCA TGGGCTGAAG CGGTCGAGAT CAATTTCCCA AATCAAGATA ACTCAGGCTC TCATATCAAC GTCTCCGGTA TGGCGTTGGC TAAGCACTCT CGCAACAAAG ATAATGCACT TAAGTTGATG GAATATCTGT CGGGTGATAA AGCGCAGAAA GCTTATGCTG AAGTGAACAT GGAGTATCCG GTTAAAGCGG ATGTTGAGCC ATCTGCTTTG GTTGCATCTT GGGGTGAGTT CACAGCGGAT AGTTTACCTA TCTATAAGCT TGCCGAATTC CATCATGCTG CGGTTAAGAT GCTAGATGAG GTTAAGTTCG ACCTATAA
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Protein sequence | MKIIKNLAVL GLVCFASVAN AADKLTVYSY RQAFLIDPIL NDFTKETGID VDVVFSKKGI AERMMREGRL SPADVVLTSD FYRLMELVDK ELVVPASSEL LNSNIPAQYR SPDETWYALT MRVRNIYSSK ERLGKLNINY EDLADPKYKG KICTRSGKHP YNISLVASMI AHHGEAETKA WLTGLKANLA RKPQGNDRAQ VKAVKEGLCD LAIGNSYYLG KMLQDPKQVP WAEAVEINFP NQDNSGSHIN VSGMALAKHS RNKDNALKLM EYLSGDKAQK AYAEVNMEYP VKADVEPSAL VASWGEFTAD SLPIYKLAEF HHAAVKMLDE VKFDL
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