| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0994 |
|---|
| Symbol | |
|---|
| ID | 6115228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1304298 |
|---|
| End bp | 1304894 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641632477 |
|---|
| Product | glutathione S-transferase domain-containing protein |
|---|
| Protein accession | YP_001759382 |
|---|
| Protein GI | 170725356 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00317376 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTAT TGTATTCAGA TGCTTCCCCC TATTCTCGCT GTGTTCGGGT CTTGATCCGT
CACCTTGAGA TTACTGGCGT TGAGGAGTGT ATTGTTGATC CTATGGAAAA TAGTGAGCTC
TTGCTTGAGT TAAACCCGTT AGGAAAAATT CCCTGTTTGC AGCTCAATGA TGGTTCATCC
CTCTATGACA GTGAAGTGAT TTTACGCTAT TTAGATCATG AGTTTGGCGC TAATCGACTA
TTTGGTGAAT ATGGTTATAA CTGGAAAAAT GAGTGTCAGC TGTCATTGAT TAATGGCTTA
TTAGACTCAG CAGTTGCGCT TAGGCAGGAG CAGATGCGAG AGCTAGAGGG AAAGCGTTCG
CTTTTTTGGA CATCTAGATT CGAGATGGCT CTGCTTCGCG GATTAAAAGA GATAGAGCAA
TCGGGGGTAA TGGTAAGTCC TCAGTTGACG ATTCAGCAGA TAGGATTAGC CTGTTTACTT
GAATATCTCG ACTTTAGGCA CGCAGATCTT CAATGGAGAA AAGTGGTACC AGCGACAGCA
ACTTGGTTAT CTGGCTTTGA ACACCTCTCA ATGATGAAAA GTACTAGGCC AATTTAA
|
|---|
| Protein sequence | MRLLYSDASP YSRCVRVLIR HLEITGVEEC IVDPMENSEL LLELNPLGKI PCLQLNDGSS
LYDSEVILRY LDHEFGANRL FGEYGYNWKN ECQLSLINGL LDSAVALRQE QMRELEGKRS
LFWTSRFEMA LLRGLKEIEQ SGVMVSPQLT IQQIGLACLL EYLDFRHADL QWRKVVPATA
TWLSGFEHLS MMKSTRPI
|
|---|
| |