Gene Swoo_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0993 
Symbol 
ID6115227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1303526 
End bp1304266 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID641632476 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_001759381 
Protein GI170725355 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00805357 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGGTTG ATGGCGAAGT TATTGAACGA ACGGATTGGT GTGACAATTT ATTCTCTTTA 
AAGATCAAAG CTAGTATCGA ACCTTATATC GCAGGTCAGT TTATTAAGTT AAGTCAGATA
ATTAATGATA AGAGGATCGG CAGAGCTTAC TCTATCGTTA ATGCCCCTAA CTCTGAATAT
GTTGAAGTGT TGGCTGTGTC GGTACTCGAT GGGCTGCTAT CTCCAAATCT GCAACAGCTT
AAGGTCGGTG ACCATATTGA GGTGTCCAGT AAAGCGGCAG GCTTTATGAC ATTAGATGAG
GTGCCACCTC AAGGCCAAGA TCTTTGGCTT CTAGCCACAG GTACTGCGGT TGGTCCCTTT
ATCTCCATTC TTGAAACCGA TGAGCCTTGG GCAAGGTTTG ATCATATTGT TCTGGTTTAT
GGTGTGAGAG AAGCGAAAGA TCTTGCTTAT AAAGAGAAGC TATTAGCACT CGAAAAGCGT
TACCCTAACC AATTTAAACT ACTCTTTTCT GTCACTCGAG AATCATACCC TAATGCGTTA
GAGAGCCGAA TATCCACTGC TTTAGCATCG GGTGAAATTG AGCAGCGTCT TGGACTTAGG
CTTACCGCTG AAGATTCACA GGTGATGCTT TGTGGTAACC CTGAGATGAT TAAGGATGCT
AATAATATTT TACTTGAGAA AGGGCTGAGT AAGAATCTAC GACGAGCCCC AGGTCAGATC
ACGATAGAGA AGTATTGGTA G
 
Protein sequence
MWVDGEVIER TDWCDNLFSL KIKASIEPYI AGQFIKLSQI INDKRIGRAY SIVNAPNSEY 
VEVLAVSVLD GLLSPNLQQL KVGDHIEVSS KAAGFMTLDE VPPQGQDLWL LATGTAVGPF
ISILETDEPW ARFDHIVLVY GVREAKDLAY KEKLLALEKR YPNQFKLLFS VTRESYPNAL
ESRISTALAS GEIEQRLGLR LTAEDSQVML CGNPEMIKDA NNILLEKGLS KNLRRAPGQI
TIEKYW