| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0980 |
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| Symbol | |
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| ID | 6115214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1290613 |
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| End bp | 1291866 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632463 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_001759368 |
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| Protein GI | 170725342 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.7151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACG AGTTAGCGAA ATTAGGTGTG ACGGTATCTG AATTAAGGTT TGCGTTAGAT
ACCTTCTATT TTTTGATCTC CGGTGCGCTA GTTATGTGGA TGGCTGCGGG TTTTGCCATG
TTAGAAGCTG GGTTGGTGAG ATCGAAAAAC ACCACAGAGA TCTTAACTAA AAACGTATGT
TTGTACTCTA TCTCCTGTGT GATGTTTCTG ATTGTGGGTT ACAACATCAT GTATGTTGAT
AACGCTGCGG GTGGCTGGCT GCCCTCTATT AGCACCTTGA TAGGTAGCCA AGAAGAGGGG
GCTGATCATG CTCTTGAGTC TGATTTCTTT TTCCAGGTTG TCTTTGTTGC AACGGCAATG
TCAATTGTAT CTGGTGCAGT GGCTGAGCGT ATGAAGCTAT GGGCCTTCTT AGCGTTTTCA
GTGGTGATGA CTGGGTTTAT CTATCCAGTA GAAGGCTATT GGACATGGGG TGAAGGTTTT
CTCTACAAGG CTGGGTTTGT TGATTTTGCT GGTAGCGGTA TTGTTCATAT GGCCGGTGCG
GCGGCAGCGA TTGCAGGGGT TCTTTTACTT GGTGCGCGTA AGGGGAAATA TGGCCCTAAT
GGACAAGTTA ATCCCATTCC TGGTTCTAAC TTGCCTATGG CAACCTTAGG TATGTTTATT
TTATGGATGG GATGGTTCGG CTTTAATGGT GGTTCGCAGT TATTAGTTTC AGATGCGGAG
AACGCAACTG CCGTGGCTAA AATCTTCCTT AACACTAACT CGGCAGCGGC CTTTGGTGCG
GTCTCTGCTT TGGTGGTATG TAGAATGGTG TGGGGCAAGG CGGATCTGAC CATGATCTTA
AATGGTGCGT TAGCAGGACT TGTTGCTATC ACTGCCGATC CTCTTTCCCC CTCTATCGCC
TTTGCCGGTG TGATAGGTTT AGTGGCTGGT GGTGTGGTTA TTTTCTCTAT TGTGGCATTG
GATAGACTTA GAATTGATGA TCCAGTAGGT GCGATATCTG TACATGGTGT TGCTGGGTTC
TTAGGCTTGA TGTTAGTGCC GTTATCAAAT GCAGATGCTA CAGTGTTAGG TCAGCTTTAT
GGTGCAGGTG TTATCTTTGC TTGGGTATTT AGCGCTTCAC TTGCTGTTTG GTATGCCCTG
AAGTTGAGCA TGGGGATCCG AGTGAGTGAA GAGGAGGAGT ATAAAGGAAT GGATGCCTCT
GACTGTGGTA TCGATGCCTA TCCTGAGTTT GTCTCGATTA AGAGCGCTCG TTAA
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| Protein sequence | MMDELAKLGV TVSELRFALD TFYFLISGAL VMWMAAGFAM LEAGLVRSKN TTEILTKNVC
LYSISCVMFL IVGYNIMYVD NAAGGWLPSI STLIGSQEEG ADHALESDFF FQVVFVATAM
SIVSGAVAER MKLWAFLAFS VVMTGFIYPV EGYWTWGEGF LYKAGFVDFA GSGIVHMAGA
AAAIAGVLLL GARKGKYGPN GQVNPIPGSN LPMATLGMFI LWMGWFGFNG GSQLLVSDAE
NATAVAKIFL NTNSAAAFGA VSALVVCRMV WGKADLTMIL NGALAGLVAI TADPLSPSIA
FAGVIGLVAG GVVIFSIVAL DRLRIDDPVG AISVHGVAGF LGLMLVPLSN ADATVLGQLY
GAGVIFAWVF SASLAVWYAL KLSMGIRVSE EEEYKGMDAS DCGIDAYPEF VSIKSAR
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