| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0967 |
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| Symbol | |
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| ID | 6115201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1278917 |
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| End bp | 1279876 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632450 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001759355 |
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| Protein GI | 170725329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000101779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCTTTTTGGT TATTTTTTAC ACTTTGCTTC TATCTGCTTG CCAACCACAA
GCACTGGATA CTCAAGAGTT AATCTTCGAG CCTAGCTATG ATGCCAGCCT ATCCTCACAA
GGGGATCTCG CGCTAGTCAG TACCGCTAAT AACGGGCTAC AACTTTGGGA TCTTCACAAG
CAAACACAAC TATTTACCTG GCGGCACGGT GAAGCTGGCG CCAGTGTTTT CGATACTGCT
ATCTCAGAAA ATCAAGCCTA TGCAGCTTCA CTCAGCCGTG ACTCTGTCGG CCTATGGCGT
ATCTCTGATG GCCACTCTCT GGGTTGGTGG TCACTCCCCT CTAGCGGTCA AAGTGTCGAT
GTAGCCAACA ATGGGGCGCT ACTTATCGGC TTAAATGATG GCAGCGTGAT GTCTCTTAGA
CCCAATAGCC GCACACTGAT TAAATTTCTA GGACACAGCG AGAAGGTCAA TAGCGTCTCC
CTCTCCTCCG ATGGGGGGTT GGCACTAACA GGCTCTAACG ATAAGCACGC CATCCTCTGG
AACCCATCAA GTGGACAACC AATACAGGAT TGGCAACTGG ATAACCGGGT GATAAAGGTT
AAATTAAATG CCAGTGGCAA CTATGCCTTT ATCGGTGATA GCACTAAGGT TGCTCAAATT
ATGGATAACG CAACCGGTGA GGTGATAAGC CAATTAAATA TCCACCGAAG GAAGATGAAC
TTCTCGGCGG CGCGCTTCTC CAGCGATGAT AGGCAGCTAA TTACAGGCAC TCCTGCAAGA
GAGTTGATAG TGTGGCAGGT TAAAACAGGG GAAAAACTGG CTAAATGGCA AGTTCAGCGA
ACCAAACATG CCCAAATTAA GGGAGCCGTT GTATACTCTG TCGCAAACAA AGATCCAGAT
AGGATCATTA GTATCAGTAG TAACGGCCTT GTGGAAACTT GGCCAGTACC TGTCCATTAG
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| Protein sequence | MKKIFLVIFY TLLLSACQPQ ALDTQELIFE PSYDASLSSQ GDLALVSTAN NGLQLWDLHK
QTQLFTWRHG EAGASVFDTA ISENQAYAAS LSRDSVGLWR ISDGHSLGWW SLPSSGQSVD
VANNGALLIG LNDGSVMSLR PNSRTLIKFL GHSEKVNSVS LSSDGGLALT GSNDKHAILW
NPSSGQPIQD WQLDNRVIKV KLNASGNYAF IGDSTKVAQI MDNATGEVIS QLNIHRRKMN
FSAARFSSDD RQLITGTPAR ELIVWQVKTG EKLAKWQVQR TKHAQIKGAV VYSVANKDPD
RIISISSNGL VETWPVPVH
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