| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0962 |
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| Symbol | |
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| ID | 6115196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1273069 |
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| End bp | 1275684 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632445 |
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| Product | peptidase M1 membrane alanine aminopeptidase |
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| Protein accession | YP_001759350 |
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| Protein GI | 170725324 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATCTGC TGCGCCTCAG CCTTAGCTCT CTACTCTCTC TCGCCCTCTT TTTTAGTGTT
GCCATCTCCC CAAAAGCAGA GACCAAAAGA GCAATAATTG AATCACGAGT CTCAGAGCTC
AGCTATCAAG TATCACTCTC ACTCATTGAT AAACCAGAAC TTCATGGGGT GAGTAAAATT
AACTTCAAAC TCACTGAGAG TGAACAGCCA CTCACCTTAG CCCTTAGCCA AGCTCAAGTC
AGCAGCTTCA TTATCAATGG CCATAAGATC TACCCTAACT ATGATGGAGA GCAGTTCACG
CTGAGTCCAA GACTATTGGA GAGTGGCAGT AACACCATAG AGATCCACTA TCGCGTTGCA
CTCGACAGTG AGAAGAGCGG CATGAGTCGT GTTATCGACC CGCTAGATCA ACATATCTAC
CTCTACTCCA ATTTCGATGA GGAGAGTGTC AGCCAGCTCC TGCCTATTTT CAATCAAGGT
AATAAAGCTA GTTTTCAATT CAATATCACG GCGCCAAAAA GCTGGACCGT AATAACGACT
CAAGCCGAGA CAGAGCTGAT TTCGAAGGGC GAATTTAATC TCTGGCAGTT TCCAGCAAGC
CCAGAGCTGC TTCCCTATCA GCTCCCTCTT TACGCGGGGC CTTTTCAGAT CTGGCACAAC
ACCACAACAG AGCTCCCACT TAGGTTGATC TCCCGCCAAT CGGTTAAAGA TACAATCGAT
TCAGAGCTGT GGTTTTCCAG CGCCCACAAT GCACTTGCTA AGTTTACTCA ACAGTATGGC
CAGCCCTATC CAAATAATAA ATTTGACCTG ATAATCAAGC CCTCCTCTTT AACCATCTCC
TCAAAAATTG GGGTAGGTAG CTTCAATGAG CAAGATTTAA CTCCAAGTGA CGAAGATAAG
TTTGCACAAC AGAGCCTTAC CTCTCAAATC GACTATCAAG TATCTATGCA GTGGTTAAAC
AAGTTAAATG TTGTTGAGCA ATCTGAAGCT GGCGAACTTG CTCGCTCTTC TCTGCGTGAA
AGCTTAGCAA GTTATATGGC AATACAGGCG CAAGCTGATG CAGGCGAGTA CTCTCCAATT
TGGCATCAGT TCTACCTGAA ACAGAAGCAA ATCGCCTATG AGCAAGATGA GCTCTATGCC
CTCTCTCTGG CAGGAAAAAC GCCAGCCATG AGCCCGTTTA AGGGAGCTGC GATACTCAAA
CAGCTTGAGT ATCAGTTCAC AAGCCGTCAT TTTCGACAGA CACTCACAGA TCTTCTGAGC
TCACAAAGCG AGCATCTTAC ACTAGCCGAC TTTATCAACA AGTTAGCCTC AAGTGAAAAG
CCCCTCAATT CCCCCCAAGA TAAAGCACAG CTTCAAGCTA CGGCAGCTCA CATAAAAGTC
GACTTTAGCT GCGCAGATAA GCGTATCACC TCATTTACTG TACTGCAGAG CTCAGCAAGT
GACATGAACA AGGATCTGAG CAATAAGCTA AACACGCAAA GAGTCACTTT AGGTTTATAT
ACTAAGGGAC GACGCCAACT ACACCGTAAC CTAGATGTCG CCATCACGTA TCAAGGTGCA
AAGACCCAAA TTAACCGGCT TATTGGGGTT CGCTGTCCCG ATCTCGTCTA TCCCAATGAT
CACGACTGGG GTTACGTGAA AGTTGAGCTG GACCCAAAGT CTATGGATAC AGCCAAACTT
GAGCTCAGTA CTCTCGAAGA CCCTCTGCTC AAATCATTGT TATGGCAAAC CCTGTGGGAG
AGTGTATTAG ATGGAAAACT GCCACTGGAT CAATTTTTAG GGGCGGTGTT TATTAATCTT
CCCCAAGAGC AAAATCCAGA AGTATTAGCT CAAGTATTAG AGCTGCTGAT AAAAAGTAAA
ACCTATCTGG AGCAGATGCA GCCAATGCAT CTGAGTTATA CCCGTAGTGC ACTAAAAGGG
ATGGCTCAGA TGAGTTTGAG AAAAACCATG TTTTACAACC AAAGCCCTGC ACTGCAAAAA
CAATGGTTTA ATGCCTATAT TCAACTTGCG ACCAACACTC AATCCCTTGA TCACTTGCAG
CAACTCATAG AAGGTTCTAC TCACATTAAC GGCCTTACCT TAACGCAAGC TATGCGCTGG
AGTATCGTCA AACAGATTAA CCGCTACGAT CATATTAAGG CTAAAAAGCT GCTGTTAGCC
GAACAGAAAA ATGATAGTTC ACAGAGCGGT AAACTCTCCT TTGTTGCAGC TCAAGCATCG
CGTCCAGAAG CCAATATCAA ACGGCGATGG CTGACTAGAA TTCAAAGTGA TGAGCGAATT
TCCCCTGCTA TCATAGAGCA GGTCATTCCC AATCTTTATC CTAAAGAGCA GGCAGAGTTA
AGTGCGATGA CCGCCGAATT AAGGTTGACT AGATTAAGCG AATTAGACAG CCGCAAAACG
CCTGAGTTTA TGGATCTGTA TGCTAAACAT TTAATTCCGG CTCAATGTAG CTACCGCGGC
ATAGCAACCC TCGAAAAAGC CCTAAAGGAG TATACAAACT TCTCCCTCAC CGCGTTGCAA
AAGAGAAAGC TCTCGCAAAC CAGTCAAGAA GCTCTACTTA GCGCCTACCT AGATGAGGTT
CGCTGCGTAA GAATTAAGGA GAGATTACTT CATTAA
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| Protein sequence | MDLLRLSLSS LLSLALFFSV AISPKAETKR AIIESRVSEL SYQVSLSLID KPELHGVSKI
NFKLTESEQP LTLALSQAQV SSFIINGHKI YPNYDGEQFT LSPRLLESGS NTIEIHYRVA
LDSEKSGMSR VIDPLDQHIY LYSNFDEESV SQLLPIFNQG NKASFQFNIT APKSWTVITT
QAETELISKG EFNLWQFPAS PELLPYQLPL YAGPFQIWHN TTTELPLRLI SRQSVKDTID
SELWFSSAHN ALAKFTQQYG QPYPNNKFDL IIKPSSLTIS SKIGVGSFNE QDLTPSDEDK
FAQQSLTSQI DYQVSMQWLN KLNVVEQSEA GELARSSLRE SLASYMAIQA QADAGEYSPI
WHQFYLKQKQ IAYEQDELYA LSLAGKTPAM SPFKGAAILK QLEYQFTSRH FRQTLTDLLS
SQSEHLTLAD FINKLASSEK PLNSPQDKAQ LQATAAHIKV DFSCADKRIT SFTVLQSSAS
DMNKDLSNKL NTQRVTLGLY TKGRRQLHRN LDVAITYQGA KTQINRLIGV RCPDLVYPND
HDWGYVKVEL DPKSMDTAKL ELSTLEDPLL KSLLWQTLWE SVLDGKLPLD QFLGAVFINL
PQEQNPEVLA QVLELLIKSK TYLEQMQPMH LSYTRSALKG MAQMSLRKTM FYNQSPALQK
QWFNAYIQLA TNTQSLDHLQ QLIEGSTHIN GLTLTQAMRW SIVKQINRYD HIKAKKLLLA
EQKNDSSQSG KLSFVAAQAS RPEANIKRRW LTRIQSDERI SPAIIEQVIP NLYPKEQAEL
SAMTAELRLT RLSELDSRKT PEFMDLYAKH LIPAQCSYRG IATLEKALKE YTNFSLTALQ
KRKLSQTSQE ALLSAYLDEV RCVRIKERLL H
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