Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0959 |
Symbol | |
ID | 6115193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1270018 |
End bp | 1271787 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632442 |
Product | alkaline phosphatase |
Protein accession | YP_001759347 |
Protein GI | 170725321 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGT CTTTTACACG TAGAGATTTT TTAGCCATGT CGGCTAAAGG TGTGGGTGCT GCTGTTGTTT CCTATGGCTT GATGGGTTGT AGTAGCAGTG ATGATGACGA TGCTAGTGCG ATTCAAGCAA GCTTTAGTCA TGGTATTGCC AGTGGCGATC CTAGCCATAG CGCTGTGATC TTATGGACTC GTGTCAGTCC AAGCAGCGAA GGTGATGTGA AAGTAAGTTG GGAAGTGGCA ACAGATTCAG GCTTTACCGA TCTGGTCACT AATGGCGAAA TGGTAACAAC CGCAGAGCGT GATTATACCG TGAAGGTCGA TGCCATCGGC CTAGACTCGG GCACAGCTTA TTACTACCGC TTTACCTCAG GTGAGCTCTC CTCTGAAGTG GGCATGACAC GCACCTTACC AGAAGGTGCT GTTGACTCCG TTAAATTGGC GGTGATGTCA TGTGCTAACT TCCCCGCTGG TTACTTTAAT ACTTATGAGC TGGCCGCTCA GCAAGATGAG CTGGATGCAG TGATTCATCT TGGTGATTAT ATCTATGAGT ATGCTCGTGG TGAATATGCC AGCGAGAATG CTGCAGAACT TGATAGAGAA GTGTTACCAG AGGGCGAGCT GTTTTTACTC AGTGATTACC GTACCCGTTA TGGCCAATAT CGCGGTGATG CAAGTTTGCA GAAGCTTCAT GCCAAGGTGC CGTTTATCAC AGTGTGGGAT GATCATGAGG TCGCAAACGA TACTTGGTCT GACGGTGCTG AAAACCATAA TGAGGGTGAG GGTAGTTTCG ATGACAGAAA AGCTGCTGCT CTTCAGGCCT ATTTTGAATG GTTACCGATC CGCCCTTGGA GTGAAGGGAA CAATGAAGAA ATCTACCGCT CATTTAGCTT CGGTGATCTT GTCGACCTGC ATATGATGGA TACACGCGTC TTAGCGCGTA ATAAACCATT GGATTATGCC GATTACATCG ATCCAGCAAC ACAAGGTATA GACAGTGCGA GGTTTATGGC AGATGTGACG AGTACCGAGC GTACCATGCT AGGTCAAGAG CAGCTGCAGT GGCTACAGCA GAGCCTATTA ACGGCTACCG GAAAATGGCA GGTGTTAGGG CAGCAGGTAT TGATGGGCAG AATGTTGCTT CCGGCAGCAA TTGCCACTCA GCAGTTAAGT ATCGCCGAGT TTGCTGAGTT GGGAGCGATT GCGCAGATAG CTGCACGGGC TCAGGCCAAT GATCCAACTT TAACGGCTAG CGAGTATAGT TTTTTGATCG CGAACCAGCA TAGGTTAACG CCTGAGGTGA TGACGCAACT GCAATTGCCT AATATTCCTT ATAATTTAGA TGCTTGGGAT GGTTACGCCT ATGAGCGTGA AGTTATCTTA GGCACGGCTA AATCAAAAGG GAGTAATCTT GTCGTTATTG CTGGTGATAC CCATAATGCC TGGGCAAATG AGCTCAGTGA TGCTGGTGGC GATACCGTTG GTGTTGAGTT TGCAACTAGC TCAGTATCCT CACCAGGCTT AGAGTTTTAC TTAGGGATCC CTGCCGATCA GCAAGCTGCA ACAGAAGCTG GCGTGACTCA GATGGTCGAT GGTCTGCAAT ACACTAACCT GCGCGACCGT GGCTTTATGG TTCTGACTTT CACAGCAGAG CAGGTGCGTA GTGACTGGCA CTTTGTTGAT ACCATCGAAT CTACGGAGTT TAGTGAAGAT ATGGATAAAC GTTATAGCGC TGTTAGCCAG CTAGGTTCGG CGAAAATAAT GCCTGCGTAA
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Protein sequence | MNRSFTRRDF LAMSAKGVGA AVVSYGLMGC SSSDDDDASA IQASFSHGIA SGDPSHSAVI LWTRVSPSSE GDVKVSWEVA TDSGFTDLVT NGEMVTTAER DYTVKVDAIG LDSGTAYYYR FTSGELSSEV GMTRTLPEGA VDSVKLAVMS CANFPAGYFN TYELAAQQDE LDAVIHLGDY IYEYARGEYA SENAAELDRE VLPEGELFLL SDYRTRYGQY RGDASLQKLH AKVPFITVWD DHEVANDTWS DGAENHNEGE GSFDDRKAAA LQAYFEWLPI RPWSEGNNEE IYRSFSFGDL VDLHMMDTRV LARNKPLDYA DYIDPATQGI DSARFMADVT STERTMLGQE QLQWLQQSLL TATGKWQVLG QQVLMGRMLL PAAIATQQLS IAEFAELGAI AQIAARAQAN DPTLTASEYS FLIANQHRLT PEVMTQLQLP NIPYNLDAWD GYAYEREVIL GTAKSKGSNL VVIAGDTHNA WANELSDAGG DTVGVEFATS SVSSPGLEFY LGIPADQQAA TEAGVTQMVD GLQYTNLRDR GFMVLTFTAE QVRSDWHFVD TIESTEFSED MDKRYSAVSQ LGSAKIMPA
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