Gene Swoo_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0959 
Symbol 
ID6115193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1270018 
End bp1271787 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content48% 
IMG OID641632442 
Productalkaline phosphatase 
Protein accessionYP_001759347 
Protein GI170725321 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGT CTTTTACACG TAGAGATTTT TTAGCCATGT CGGCTAAAGG TGTGGGTGCT 
GCTGTTGTTT CCTATGGCTT GATGGGTTGT AGTAGCAGTG ATGATGACGA TGCTAGTGCG
ATTCAAGCAA GCTTTAGTCA TGGTATTGCC AGTGGCGATC CTAGCCATAG CGCTGTGATC
TTATGGACTC GTGTCAGTCC AAGCAGCGAA GGTGATGTGA AAGTAAGTTG GGAAGTGGCA
ACAGATTCAG GCTTTACCGA TCTGGTCACT AATGGCGAAA TGGTAACAAC CGCAGAGCGT
GATTATACCG TGAAGGTCGA TGCCATCGGC CTAGACTCGG GCACAGCTTA TTACTACCGC
TTTACCTCAG GTGAGCTCTC CTCTGAAGTG GGCATGACAC GCACCTTACC AGAAGGTGCT
GTTGACTCCG TTAAATTGGC GGTGATGTCA TGTGCTAACT TCCCCGCTGG TTACTTTAAT
ACTTATGAGC TGGCCGCTCA GCAAGATGAG CTGGATGCAG TGATTCATCT TGGTGATTAT
ATCTATGAGT ATGCTCGTGG TGAATATGCC AGCGAGAATG CTGCAGAACT TGATAGAGAA
GTGTTACCAG AGGGCGAGCT GTTTTTACTC AGTGATTACC GTACCCGTTA TGGCCAATAT
CGCGGTGATG CAAGTTTGCA GAAGCTTCAT GCCAAGGTGC CGTTTATCAC AGTGTGGGAT
GATCATGAGG TCGCAAACGA TACTTGGTCT GACGGTGCTG AAAACCATAA TGAGGGTGAG
GGTAGTTTCG ATGACAGAAA AGCTGCTGCT CTTCAGGCCT ATTTTGAATG GTTACCGATC
CGCCCTTGGA GTGAAGGGAA CAATGAAGAA ATCTACCGCT CATTTAGCTT CGGTGATCTT
GTCGACCTGC ATATGATGGA TACACGCGTC TTAGCGCGTA ATAAACCATT GGATTATGCC
GATTACATCG ATCCAGCAAC ACAAGGTATA GACAGTGCGA GGTTTATGGC AGATGTGACG
AGTACCGAGC GTACCATGCT AGGTCAAGAG CAGCTGCAGT GGCTACAGCA GAGCCTATTA
ACGGCTACCG GAAAATGGCA GGTGTTAGGG CAGCAGGTAT TGATGGGCAG AATGTTGCTT
CCGGCAGCAA TTGCCACTCA GCAGTTAAGT ATCGCCGAGT TTGCTGAGTT GGGAGCGATT
GCGCAGATAG CTGCACGGGC TCAGGCCAAT GATCCAACTT TAACGGCTAG CGAGTATAGT
TTTTTGATCG CGAACCAGCA TAGGTTAACG CCTGAGGTGA TGACGCAACT GCAATTGCCT
AATATTCCTT ATAATTTAGA TGCTTGGGAT GGTTACGCCT ATGAGCGTGA AGTTATCTTA
GGCACGGCTA AATCAAAAGG GAGTAATCTT GTCGTTATTG CTGGTGATAC CCATAATGCC
TGGGCAAATG AGCTCAGTGA TGCTGGTGGC GATACCGTTG GTGTTGAGTT TGCAACTAGC
TCAGTATCCT CACCAGGCTT AGAGTTTTAC TTAGGGATCC CTGCCGATCA GCAAGCTGCA
ACAGAAGCTG GCGTGACTCA GATGGTCGAT GGTCTGCAAT ACACTAACCT GCGCGACCGT
GGCTTTATGG TTCTGACTTT CACAGCAGAG CAGGTGCGTA GTGACTGGCA CTTTGTTGAT
ACCATCGAAT CTACGGAGTT TAGTGAAGAT ATGGATAAAC GTTATAGCGC TGTTAGCCAG
CTAGGTTCGG CGAAAATAAT GCCTGCGTAA
 
Protein sequence
MNRSFTRRDF LAMSAKGVGA AVVSYGLMGC SSSDDDDASA IQASFSHGIA SGDPSHSAVI 
LWTRVSPSSE GDVKVSWEVA TDSGFTDLVT NGEMVTTAER DYTVKVDAIG LDSGTAYYYR
FTSGELSSEV GMTRTLPEGA VDSVKLAVMS CANFPAGYFN TYELAAQQDE LDAVIHLGDY
IYEYARGEYA SENAAELDRE VLPEGELFLL SDYRTRYGQY RGDASLQKLH AKVPFITVWD
DHEVANDTWS DGAENHNEGE GSFDDRKAAA LQAYFEWLPI RPWSEGNNEE IYRSFSFGDL
VDLHMMDTRV LARNKPLDYA DYIDPATQGI DSARFMADVT STERTMLGQE QLQWLQQSLL
TATGKWQVLG QQVLMGRMLL PAAIATQQLS IAEFAELGAI AQIAARAQAN DPTLTASEYS
FLIANQHRLT PEVMTQLQLP NIPYNLDAWD GYAYEREVIL GTAKSKGSNL VVIAGDTHNA
WANELSDAGG DTVGVEFATS SVSSPGLEFY LGIPADQQAA TEAGVTQMVD GLQYTNLRDR
GFMVLTFTAE QVRSDWHFVD TIESTEFSED MDKRYSAVSQ LGSAKIMPA