| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0957 |
|---|
| Symbol | |
|---|
| ID | 6115191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1268702 |
|---|
| End bp | 1269349 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641632440 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_001759345 |
|---|
| Protein GI | 170725319 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TAATATTGAG TTTGGTCTTT GGTTCTACCT TAGTGGCGTG CGGTGGTGGA
AGTGATTCAG GAGACACTAG CGTGCCACCG AGTCCTGAGC CTGCTCCGGA GTTGGCCGCT
GACGTATGTT ATCTGATGGA TACCAGTATG GGAGAGGTGA AGTTGGCCAT CGATCTGACC
AATACCCCTG TGACTGGCAA TAACTTTAAG CAGTATGTGG ACGAAGGCTT CTATGATGGT
GTCATCTTTC ATCGAGTGAT AACTCAATTT ATGGCGCAGA CTGGGGGTTT TACACCTGGA
CTCATCTATA AAGAGGGGCG AGATCCCATT ACTAACGAAT CCGATGTTGG CATAAGCAAT
GCTCGCGGAA CCTTAGCCAT GGCACGTACC AGCGCACCTA ACTCTGCGAC ATCACAGTTC
TTTATCAACG CTGTCGATAA TACATTTTTA GATAAGGAGC ATGCGCAAGA TGGGGTGGGC
TACGCAGTTT TTGGTAAAGT TATTGAAGGT TTAGAGGATG TGATCGATCA GATAGATATC
GTTAAAACAG GTGTCGCTAA AGATCCTGAT GGGAATAGCT TTAGCGATGT CCCTGTTGAG
GATATTGTGA TCAATAGTAT CTCTGAAACA GCTTGTCCAA CACGCTAA
|
|---|
| Protein sequence | MKKLILSLVF GSTLVACGGG SDSGDTSVPP SPEPAPELAA DVCYLMDTSM GEVKLAIDLT
NTPVTGNNFK QYVDEGFYDG VIFHRVITQF MAQTGGFTPG LIYKEGRDPI TNESDVGISN
ARGTLAMART SAPNSATSQF FINAVDNTFL DKEHAQDGVG YAVFGKVIEG LEDVIDQIDI
VKTGVAKDPD GNSFSDVPVE DIVINSISET ACPTR
|
|---|
| |