| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0939 |
|---|
| Symbol | |
|---|
| ID | 6115173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1246865 |
|---|
| End bp | 1247963 |
|---|
| Gene Length | 1099 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641632422 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001759327 |
|---|
| Protein GI | 170725301 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0179192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAG TAAACCCGGT TAAATTTAAA ATCAAAGACC TTGCCGATCG CACCCTTCTA
CTCCGGAGGT ATCTTTGACT ATGATGCCAA GAAAGAGCGT TTAGAAGAGG TTAGTGCTGA
GCTTGAAAGC AGTGAGGTTT GGAACAACCC TGAAAATGCC CAAGCGTTAG GTAAAGAGCG
TTCAGCTTTA GAGTTAGTGG TTAAGACTAT CGATGATATG GACTCAGGTC TTGAAGATGT
CGAAGGGTTA GTCGAGCTAG CGGTCGAAGA GGAAGATGAA GAGACATTTG CTGATGCCAG
TAGTGAGCTC GATGCGCTAG AGAAGCGTCT TGAGGAGCTT GAGTTCCGTC GTATGTTCTC
TGGCCCTCAT GATATCTCTG ACTGTTACTT AGATATTCAA TCTGGCTCTG GCGGTACTGA
AGCACAGGAT TGGGCTAATA TGGTGCTGCG TATGTTCCTT CGTTGGGGCG AAGCCCATGA
TTATAAGCCT GAGCTTATTG AAGTGACCGA TGGTGATGTG GCCGGTATTA AAGGTGCAAC
CATTAAGTTT ACTGGGGAAT ATGCTTTTGG CTCGTTGCGT ACCGAAACTG GTGTACACCG
TTTAGTGCGT AAATCGCCTT TTGACTCTTC AGGAAAGCGT CATACCTCTT TCTGTTCTGT
GTTTGTGTAT CCAGAGATTG ATGATTCGAT TGAGATTGAT ATCAATCCTT CAGATTTGAG
GATTGATACT TATCGCGCCT CAGGGGCTGG TGGTCAGCAC GTCAACAAAA CAGAATCAGC
GATCCGTATT ACTCACGTGC CAACCAATAC CGTTGTACAG TGTCAAAACG ATCGCTCACA
ACATAAAAAC CGTGATGCCG CGATGAAGCA GCTTAAAGCA AAACTCTATG AGTTAGAAAT
GCTTAAGCAA AATGCCGATA AGCAGCAGGC GGAAGATGCC AAGTCAGACA TTGGCTGGGG
TAGTCAGATC CGTTCATACG TGCTAGATGA TGCACGCATT AAAGATCTGC GCACCGGCGT
CGAAAGTAGA AATACCCAGA GCGTGCTTGA TGGCGATCTG GATAAGTTTA TTGAAGCCAG
CTTAAAATCT GGTTTGTAA
|
|---|
| Protein sequence | MFEVNPVKFK IKDLADRTLL LRGIFDYDAK KERLEEVSAE LESSEVWNNP ENAQALGKER
SALELVVKTI DDMDSGLEDV EGLVELAVEE EDEETFADAS SELDALEKRL EELEFRRMFS
GPHDISDCYL DIQSGSGGTE AQDWANMVLR MFLRWGEAHD YKPELIEVTD GDVAGIKGAT
IKFTGEYAFG SLRTETGVHR LVRKSPFDSS GKRHTSFCSV FVYPEIDDSI EIDINPSDLR
IDTYRASGAG GQHVNKTESA IRITHVPTNT VVQCQNDRSQ HKNRDAAMKQ LKAKLYELEM
LKQNADKQQA EDAKSDIGWG SQIRSYVLDD ARIKDLRTGV ESRNTQSVLD GDLDKFIEAS
LKSGL
|
|---|
| |