Gene Swoo_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0934 
Symbol 
ID6115168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1238127 
End bp1238618 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID641632417 
ProductMarR family transcriptional regulator 
Protein accessionYP_001759322 
Protein GI170725296 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATTGTG CGCAATCAAA TGAGCTTCAA GGATATATGT CAATAGATCA AAAGTGCAAT 
CCTCTCTCAC TGGACAATCA AGTCTGTTTC TCTCTCTACA GTGCCACTAA TGCTATGGTC
AGAGCGTATC GACCTCTACT TAATGAACTA GATCTTACCT ACCCCCAATA TTTGGCTATG
TTGGTGCTTT GGGATAATGA GGGGATCAGT GTAAAGACCT TAGGTGAACA ACTCCATCTT
GACTCTGGTA CGTTAACGCC ACTGTTGAAA CGTTTGGAAA CCAAAGGGCT AGTGAGCAGA
GGAAGAAGCG AAGTCGACGA AAGGGTGAGA GTACTGCATA TCACAGAGAA AGGGCGCGAG
TTAAAGCAGT TTGCAGCTAA GGTGCCAGAG AAGATGCGCT GTAAGCTCAA TATCAAACCT
GAAGTCTTTT CCGAGCTCAA GTCGCTATGC GATCAAGCTT ATATGAGTTT GACTCAGGCT
GAGAAAGAGT AA
 
Protein sequence
MHCAQSNELQ GYMSIDQKCN PLSLDNQVCF SLYSATNAMV RAYRPLLNEL DLTYPQYLAM 
LVLWDNEGIS VKTLGEQLHL DSGTLTPLLK RLETKGLVSR GRSEVDERVR VLHITEKGRE
LKQFAAKVPE KMRCKLNIKP EVFSELKSLC DQAYMSLTQA EKE