| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0927 |
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| Symbol | |
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| ID | 6115161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1230971 |
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| End bp | 1231714 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632410 |
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| Product | spermine synthase |
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| Protein accession | YP_001759315 |
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| Protein GI | 170725289 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAAC TTGAGACACT ATATCAGAGC GAAGATGAGT ACGGTCCTCT ATTAGTACTG
GAAGATAAGC ACATGCGTGT GCTCTCATTT GGTGATAATG ATGAGCAGAG TAAGCTATTA
AAGCTACAAC CTTTTCTACC TCAACATACT TATGTACAGG CTATGTTATT GGTTCTGTTA
TTTATTAAAC CTAAGCGGGT AGTCATACTG GGTTTAGGTG GAGGTGGATT GATTCATGCG
CTACGTCATT ATGATGCAGG AATTAAAATA ACTGCGGTAG AGCTAAGAGC TCAAGTGATA
GAGATAGCTA AACGTTTTTT TCAACTACCG ATAGGCAAAA AGCTGACATT AATCCACCAG
GATGCTGCGG AGTTTCTTGA GCAGGCGGAG CATAAAAAGG CCGATGTTAT CTTTGCCGAT
ATCTATGGGG CTGATGGTGT AGATGAAAAC CAGTTGTCAG ATGCTTTCAT TAAAAATGCC
GCAATGATGA TCAAAGCCGA TGGTTTTCTG GTCTTAAACT GTTGGAAAGA GCATAGCCAA
AATCGAGAGT TGCTGTCGTT ACTGCAAACT TACTTTGTTG AGGTTAGGGC ATGTTTAACC
GGAGGAGGAA ACTGGGTGGT GTTTGCCAGT AAAACAAAGC GAGATATCAC CAGTAGTGGC
ATGAAAGCTA AAGCACACAG TTTATCCCTG CAGTTGGATT TTACTTTGAG TCGCTCATTG
ACTCGCTTTG ACCACTGGGT ATAA
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| Protein sequence | MTELETLYQS EDEYGPLLVL EDKHMRVLSF GDNDEQSKLL KLQPFLPQHT YVQAMLLVLL
FIKPKRVVIL GLGGGGLIHA LRHYDAGIKI TAVELRAQVI EIAKRFFQLP IGKKLTLIHQ
DAAEFLEQAE HKKADVIFAD IYGADGVDEN QLSDAFIKNA AMMIKADGFL VLNCWKEHSQ
NRELLSLLQT YFVEVRACLT GGGNWVVFAS KTKRDITSSG MKAKAHSLSL QLDFTLSRSL
TRFDHWV
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