Gene Swoo_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0915 
Symbol 
ID6115149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1219153 
End bp1221147 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content42% 
IMG OID641632398 
Producthypothetical protein 
Protein accessionYP_001759303 
Protein GI170725277 
COG category[S] Function unknown 
COG ID[COG3930] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02421] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.699671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACGT TATCTGAGAA GGAGTGTATT GCACTCATTA ACAGGGGCGA GTGTTTTCAA 
GCTGAGGTTG AAGATGGCGC TTTCATTGTA AAAATTGATG ATTACTCACC TATGGTCTGT
ACTGCTATTC ATAATGGCCA CAGATTGCGA GATGATCTTA AAAAATCCTT TTTACTGAGT
AAAGAGGAGC GATTTTATGA GGAAGATCCC TATACGGATG AGTTGATCTC CTCATTTCCG
ATTGTCTTGA TTGGTAATGA TTCTCGCTTT GAATATGACT TGAATCGGGC TAAAACTTTG
TCGACTTACT ATAAAACAGC TTGGAATAAG CAGGTTTGGG AAAAGCCGCT GTCGACTAAA
CAAAGAGCCT TTAGTCATGC TAAGCATGAG TCATTCTACA ATGTACTTGA AGCCATCATT
GCTCGATTAG AGATGCTATT TAAAAATAGC ATCGTCTTTG ACATGCACTC TTATAATCAT
CAAAGGATCG CGAAAGACAC GCCAACGTTT AATATTGGTT CAGGTCAGAT TGATGTCGAG
CGTTGGGGGA GCATCAGTCA CTATTTTGAG CGAGAGCTGA ATAAGATAGC CCTGCCAAAT
CTCGATGTGA GGGCGGCCAC AGATGAGGTC TTTCAGGGGC GAGGCTACCT TATCGCTCAC
ATTAACGCTC ACTTTGACAA CACCTTAGTG TTACCGGTTG AGGTTAAAAA AGTCTTTATG
GATGAGACGA GTGGGGAGGT TTATCCTCTG GTACTCGAAG AGCTAAAAGC TGGCGTGAAA
CACGCTATCT CTGAAACAGC GGCTCACTTT ATGCGCCGTT TTGGAAAACG CAAAACCGTT
AGTAATGCCG AACTACTCTC ATCATCTCTG TCACCGGAGC TGGTTGAACT AGACAAGCAG
CTCTATGGAC TGTGTAGAAG CGTTGAGACA CTCAGGTTTA TTAATCCAGT AAATATTGCC
AGTGAGCGCA AGAATTTTTT TGGTAAAAAA GCCTTAATTA CGCCTGATTT TAGTTATAAA
CAGTTGAATA TTAATCCTTA CCAATTTAGA GAGCAGTTGT ATAAACTCCC TGTCGAACAG
GTGATGGACG CTGATATTCA ACAACTATAT CGCCATGTTA TCGATAATAT GGCAACTAAA
ATAGACCTGA TATCTTCCAT TGGCAGTGAT GATTTTGTTT ACAACTCGCT GAAATATTAT
GGTCAGCCTG ACAAGAACGA TCTGGCTAAT GCTGAGTTTA TTTTAAGGGC GCCTGAAATC
GAAGGCGATG ATGAACCCGA ACTTCATTCA GCCGATGTAG CAGTTGAGTT ATTTAAAGAA
AAAGCCAAGG AGTGGGGCCT TAAATGCAAG ATTGAGAAGT CATCTCGAAT TGTTGCCAAG
GCGATGGTCG ATAATGATAA AGCCTGCTTA TTGATCAATA AAGAGGCCTC ATTTACATCC
AAGGAGTTAG TTGCATTTGC TTACCACGAG TTAGGTGTGC ATATGTTGAC AACTGTGAAT
GCTAAGCGTC AGAAACTGAA AGTATTTTCT CTAGGTTTGA GCGGCAATAC CCAGACTCAA
GAGGGGCTTG CCATCTACAG CGAATATTGC TCTGGCAATT TAACACTAAG CCGATTGAAA
ACCTTAGCGC TTAGGGTGGT TGCCGTTAAT TTAATGCTGC AGCACAGAGA TTTCCCTGTG
ACTTATCAGG CATTGGTTAA GGATTACGGT GTAAGCTGTG AGCAAGCGTT TACTCTGACA
ACTCGTGTGT ATCGTGGTGG TGGTTTTACT AAAGATTACT TATACCTGAA AGGGTTTAGA
GATATCTATA CTTTAGGCAA AACGACTAAG CTTGATAATC TATTAGTGGG CAAAACAGGC
TTGTTAGACC TGCCTACAGT TAATGAGATG GTGGGGCGAA ACTTGTTGGT AAAACCTGTT
TCATTGTTTG AGTTGCAATT AAAGCCGCCT CAACCACTCT CGATTATCGA TTATCTGGTT
TCAGGTATCC GTTAA
 
Protein sequence
MLTLSEKECI ALINRGECFQ AEVEDGAFIV KIDDYSPMVC TAIHNGHRLR DDLKKSFLLS 
KEERFYEEDP YTDELISSFP IVLIGNDSRF EYDLNRAKTL STYYKTAWNK QVWEKPLSTK
QRAFSHAKHE SFYNVLEAII ARLEMLFKNS IVFDMHSYNH QRIAKDTPTF NIGSGQIDVE
RWGSISHYFE RELNKIALPN LDVRAATDEV FQGRGYLIAH INAHFDNTLV LPVEVKKVFM
DETSGEVYPL VLEELKAGVK HAISETAAHF MRRFGKRKTV SNAELLSSSL SPELVELDKQ
LYGLCRSVET LRFINPVNIA SERKNFFGKK ALITPDFSYK QLNINPYQFR EQLYKLPVEQ
VMDADIQQLY RHVIDNMATK IDLISSIGSD DFVYNSLKYY GQPDKNDLAN AEFILRAPEI
EGDDEPELHS ADVAVELFKE KAKEWGLKCK IEKSSRIVAK AMVDNDKACL LINKEASFTS
KELVAFAYHE LGVHMLTTVN AKRQKLKVFS LGLSGNTQTQ EGLAIYSEYC SGNLTLSRLK
TLALRVVAVN LMLQHRDFPV TYQALVKDYG VSCEQAFTLT TRVYRGGGFT KDYLYLKGFR
DIYTLGKTTK LDNLLVGKTG LLDLPTVNEM VGRNLLVKPV SLFELQLKPP QPLSIIDYLV
SGIR