| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0895 |
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| Symbol | |
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| ID | 6115129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1193396 |
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| End bp | 1194322 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632379 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001759284 |
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| Protein GI | 170725258 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCAAT CTGATAACAA TATCGTGCCA GTTCAGCATA AGAGCGATCC CTTGATTGAA
CTCTTTCTTG ATGACCTCTG GTCCAGCCGT GGGCTAAGTA GTAATACCTT GAGTGCTTAT
CGTACCGATC TCTGTCATTT TGAGCATTAT CTTATCAAGT CTGGGATCGC CTTGTGTGAT
GCGACGCAGG GAACGATTAG GGATTATCTG GATGTTCGTT TCGAGAAAGG CTTTGCACGC
ACGAGTAGCG CACGACTTAT CAGTAGTCTA AGACGTTTCT ATGGCTTCTT AGTGATTCAG
AATCGAATCG AGGTAGACCC CACTGCTCAG ATTAAATCGC CGCAGCTAGC CCGTAAACTT
CCAGACTCTC TGAGTGAAGC GGATGTGGAT AGCTTACTGA GCGAGCCCAA TCTTGACGAC
CCAATAGAGT GCCGCGATAA AGCGATGCTT GAGCTTTTGT ATGCCACAGG ACTTAGGGTT
ACTGAACTTG TGAGCCTGAC CATGGAGCAG ATAAGCCTAC GCCAGGGAGT AGTTAGAGTG
GTTGGTAAAG GGGGCAAGGA GCGACTTGTT CCCTTAGGTG AGATGGCTAT CTCAGAGGTA
GAGAGTTACT TAGTAGCCGC TAGAGGTGAG CTGCTTAAAC AGAAGATGAG TGATGTGCTG
TTTCCGTCAA AGCGGGGCAG CATGATGACG CGGCAAACCT TCTGGCATCG AATTAAGCAC
TATGCATTGA GGGCGGGAAT AAGTACTGAC CTTTCACCAC ATACCTTAAG GCATGCGTTT
GCGACGCACC TACTCAATCA TGGGGCAGAT CTGCGAGTGG TGCAGTTACT TTTGGGCCAT
AGCGATCTCT CTACCACACA GATCTATACC CATGTGGCTA AGGCGAGATT GAGTCAGCTG
CATAGCGAAC ACCACCCAAG AGGTTAG
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| Protein sequence | MSQSDNNIVP VQHKSDPLIE LFLDDLWSSR GLSSNTLSAY RTDLCHFEHY LIKSGIALCD
ATQGTIRDYL DVRFEKGFAR TSSARLISSL RRFYGFLVIQ NRIEVDPTAQ IKSPQLARKL
PDSLSEADVD SLLSEPNLDD PIECRDKAML ELLYATGLRV TELVSLTMEQ ISLRQGVVRV
VGKGGKERLV PLGEMAISEV ESYLVAARGE LLKQKMSDVL FPSKRGSMMT RQTFWHRIKH
YALRAGISTD LSPHTLRHAF ATHLLNHGAD LRVVQLLLGH SDLSTTQIYT HVAKARLSQL
HSEHHPRG
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