| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0892 |
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| Symbol | |
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| ID | 6115126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1189298 |
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| End bp | 1190524 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632376 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_001759281 |
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| Protein GI | 170725255 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.9005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTTG AAGACCTCCT GCTTGACCCT ATTTTATTAG AGTCATTAAA AGCCATGGGC
CACCACAAGC CCACCACCAT ACAGCAACAA ACGATCCCCT TGGCCATGGA TCAGCGGGAC
ATTCTTGCGC GTGCACCGAC TGGAACAGGC AAAACAGCCA GCTTCCTACT CCCGGCTCTA
CAGCATATTA TCGATTTCCC GCGTCGATTC TCAGGTCAGG CACGTGTTGT CATTCTCACG
CCTACCCGTG AACTGGCAAG TCAGATCCAC AGATATGCCT CTCACCTTGC CTATGAGCTA
GACCTTAATA CTGTCATCAT CACAGGTGGT GTCCCTTATG CGCCTCAAGA GGAAGCATTA
AAAGGGAATG TTGATATATT AGTGGCAACC CCAGGCCGTC TGATGGAGTA CCTAGATAAG
GGACTCTTTA ATGCTGAAGA GGTGGAGATC TTAGTGATCG ATGAAGCCGA CAGAATGTTA
GATATGGGTT TCTCAGCCGT TGTCGAAACC ATTGCCATTG AGTCTGTTGG CCGTAAACAG
ACTATGCTGT TTTCTGCCAC ACTAGAGGGC AGCGATGTCG GCCGCTTCTC CCACCAACTG
CTTACCGATC CGGTAAAGGT TGAAGCCGAA GCGCCTCGCA GTGAGAAAGC GAAAATTCAT
CAGTGGATCC ATATTGCCGA TGATAAAGAG CACAAGTTTA AACTCTTGTG TAGCATACTT
CAGCAAGAAG AGACCCAAAG AGCCATTGTA TTCGTTAAAA CCCGCGAAGC CGTTGCCAGC
TTAGAGGGGA TGCTGCAGCG TGTAGGCATA CCTTGCAGCT ATATGCGCGG TGATATGGAG
CAAAAGCAAA GATTCCAAGC ACTGGGTCGT TTCACTAAAG GTGAAGTGAA TGTCTTGCTT
GCCACCGATG TTGCCGCACG AGGGATCGAT GTTGAAGATA TCACCCATGT GATCAACTTC
GATATGCCAC GCTCTGCCGA TACCTATGTT CACCGTATCG GTCGTACAGG CCGTGCAGGT
GCAAAGGGAA CGGCAATCTC CCTAGTCGAA GCACATGATA TCCGTGTTGT TGGTAAGATT
GAACGTTATA TGGATCAGCC ACTAAAACGT CGCTTCATTA AAGATCTTAG ACCTAAGAAC
AAAGAGGCTA AACCACCAGG GAAAAACAAG GTTAAGCCTA GTGAGAAAAG CTTCAGTAAG
AAGAATAAAA AGAAGAAAAA GAAATAA
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| Protein sequence | MLFEDLLLDP ILLESLKAMG HHKPTTIQQQ TIPLAMDQRD ILARAPTGTG KTASFLLPAL
QHIIDFPRRF SGQARVVILT PTRELASQIH RYASHLAYEL DLNTVIITGG VPYAPQEEAL
KGNVDILVAT PGRLMEYLDK GLFNAEEVEI LVIDEADRML DMGFSAVVET IAIESVGRKQ
TMLFSATLEG SDVGRFSHQL LTDPVKVEAE APRSEKAKIH QWIHIADDKE HKFKLLCSIL
QQEETQRAIV FVKTREAVAS LEGMLQRVGI PCSYMRGDME QKQRFQALGR FTKGEVNVLL
ATDVAARGID VEDITHVINF DMPRSADTYV HRIGRTGRAG AKGTAISLVE AHDIRVVGKI
ERYMDQPLKR RFIKDLRPKN KEAKPPGKNK VKPSEKSFSK KNKKKKKK
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