| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0876 |
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| Symbol | |
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| ID | 6115110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1168730 |
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| End bp | 1170721 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632360 |
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| Product | transketolase |
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| Protein accession | YP_001759265 |
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| Protein GI | 170725239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTC GTAAAGAACT CGCAAACGCT ATCCGTGCGT TAACCATGGA TGCCGTTCAA
AAAGCCAATT CAGGTCACCC AGGTGCACCA ATGGGGATGG CTGACATCGC TGAAGTGCTT
TGGAATGATT TCCTTAAGCA TAACCCGAAT AACCCTGAGT GGGTTGATCG TGACCGTTTT
ATCCTATCAA ACGGCCATGG CTCTATGCTT ATCTACTCTT TGCTTCATTT GACTGGCTAT
GCACTGCCTA TCGAAGAGCT TAAAAACTTC CGTCAACTGC ACTCAAAAAC ACCGGGTCAC
CCTGAATATG GTTACACGCC AGGTGTTGAA ACTACGACAG GTCCATTAGG CGCTGGTATC
AGTAATGCTG TGGGTATGGC GATTGCTGAA AAGACATTGG CTGCTCAGTT TAACCAGCCT
GGCCACGATA TCGTTGACCA CTTCACATAC TGCTTCCTAG GCGATGGTTG TTTGATGGAA
GGTATCTCTC ATGAAGCATG TTCACTAGCA GGGACCTTAG GTCTTGGTAA GCTAGTGGCG
TTCTGGGATG ACAACGGTAT CTCTATCGAT GGCCATGTAG AAGGTTGGTT CACCGACGAT
ACACCTAAGC GTTTCGAATC ATACGGCTGG CATGTAATTG CTAACGTTGA TGGCCATGAT
AGCGATGCTA TCCGTGCTGC TATCGAAGAA GCTAAGTCTG TGACAGACAA GCCAACAATG
ATCTGCTGCA AAACCACTAT CGGTTTTGGT TCACCAAACA AGTCTGGCAG CCATGATTGT
CACGGCGCAC CATTAGGTGA TGCTGAGATT GCTGCTGCAC GTGAATTCCT TGGTTGGAAC
CACGATGCAT TCGAGATCCC AGAAAACGTA TACGCAGGTT GGGACGCTAA AGAAGCGGGC
CAAGCGAATG AGTCAAACTG GAACGATAAG TTCGCGGCAT ATGAAGCGGC TTTCCCTGAG
CTAGCAGCTG AATATAAGCG TCGTGTGATC ACGGGCGAAC TACCAGCTGA CTTTGAAGAG
AAGGCACAGG CTTTCATTCA AGAGTCTCAA GATAAAGCGG AAGGCATTGC TAGCCGTAAA
GCATCACAAA ATGCGATTGG TGCATTTGGT GCAATTCTAC CTGAAATGCT AGGTGGCTCA
GCAGACCTTG CTGGTTCTAA CCTAACGCTT TGGTCTGGCT CTAAAGGTAT TCAAGACGAT
CCTGCTGGTA ACTACATCTA CTACGGTGTA CGTGAATTCG GCATGAGCGG TATCATGAAC
GGTGCATCAC TTCACGGTGG TTTCATCAAT TATGGTGCAA CGTTCATGAT GTTTATGGAG
TACGCACGTA ACGCAGTACG TATGTCTGCA TTGATGGGTA TCCAAAATAT CTTCGTTTAC
ACCCATGATT CAATCGGTCA AGGTGAAGAT GGTCCAACTC ACCAGCCAGT AGAGCAGCTT
GCTAACCTAC GTATGACACC AAACATGACT GTATGGCGTC CATGTGATGC GGCGGAAACT
GCTGTATCTT GGAAGAGTGC AATCGAGCGC CGTACTGCGC CAACTTCGCT TATCTTTAGC
CGTCAAGGTT TGAAAGCACA AGCGCGCACC GCTGAGCAGT TAGCAAATGT GGCTAAAGGT
GGTTATGTAC TGAGTGATTG CGCTGGTACG CCAGAGCTAA TCCTTATTGC TACAGGCTCT
GAAGTGCAAC TGGCTCTTGA TTCTGCTGCT GCACTGACAG AGCAAGGTAA GCAGGTTCGC
GTTGTCTCTA TGCCGTCAAC TAACGAGTTC GACAAGCAAG ATGCAGCTTA TAAAGAGTCT
GTACTGCCAC GTAGCGTTAC TAAGCGCGTT GCAATCGAAG CGGCTCACGT TGATTTCTGG
CACAAGTATG TTGGTTTCGA CGGCGCGGTT GTTGGTATGA CAACCTTCGG CGAATCAGCA
CCAGGTGGTG ATTTGATGAA GCACTTCGGT TTCACTGTTG AAAACGTCGT TGCTACAGTT
AACGCTCTTT AA
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| Protein sequence | MSSRKELANA IRALTMDAVQ KANSGHPGAP MGMADIAEVL WNDFLKHNPN NPEWVDRDRF
ILSNGHGSML IYSLLHLTGY ALPIEELKNF RQLHSKTPGH PEYGYTPGVE TTTGPLGAGI
SNAVGMAIAE KTLAAQFNQP GHDIVDHFTY CFLGDGCLME GISHEACSLA GTLGLGKLVA
FWDDNGISID GHVEGWFTDD TPKRFESYGW HVIANVDGHD SDAIRAAIEE AKSVTDKPTM
ICCKTTIGFG SPNKSGSHDC HGAPLGDAEI AAAREFLGWN HDAFEIPENV YAGWDAKEAG
QANESNWNDK FAAYEAAFPE LAAEYKRRVI TGELPADFEE KAQAFIQESQ DKAEGIASRK
ASQNAIGAFG AILPEMLGGS ADLAGSNLTL WSGSKGIQDD PAGNYIYYGV REFGMSGIMN
GASLHGGFIN YGATFMMFME YARNAVRMSA LMGIQNIFVY THDSIGQGED GPTHQPVEQL
ANLRMTPNMT VWRPCDAAET AVSWKSAIER RTAPTSLIFS RQGLKAQART AEQLANVAKG
GYVLSDCAGT PELILIATGS EVQLALDSAA ALTEQGKQVR VVSMPSTNEF DKQDAAYKES
VLPRSVTKRV AIEAAHVDFW HKYVGFDGAV VGMTTFGESA PGGDLMKHFG FTVENVVATV
NAL
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