Gene Swoo_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0872 
Symbol 
ID6115106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1163459 
End bp1164154 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID641632356 
Producthypothetical protein 
Protein accessionYP_001759261 
Protein GI170725235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTA CATCGACACA TAAACCTCGG CCTATGGTTG ACCTGTTAGT GAGTATCGTC 
ATCCCCGCTT TTATTCTAAT GAAGCTAAGT GGTGATGATC AGCTAGGGGC GAGTGGTGGA
TTAATGTTGG CGTTAAGTTT TCCGCTGGGA TGGGGCATAT TTGAGCTGAT AAAATACAGG
AAGTTTAATT TTATCGCCTT ACTTGGCTTA GCTAATGTGA TGTTAACTGG CGGCATTGGT
TTACTGGAGC TTGACCTTAA ATGGTTGGCA ATTAAAGAAG CCGCGATCCC AGCCGCGATC
GGCATTGCAG TGCTTATTTC GACCTTTACT TCTAAGCCAC TAATCAAAGC CCTAGTCTTT
AATCCAGCGG TGATGGACGT AGATAAGATC ATGAAGCGCT TACAACAGAA CAATTGTATG
GCGGCGTTTG AGCAGCGACT CATGACGGCT ACCTATTTGG TTGCAGGCTC GTTTGCGTTC
TCCGCCACCA TGAATTATGT GTTGGCTAAA TGGCTAGTGA CCAGCCCAAC AGGTACCCCT
GAGTTCAATG CAGAGTTGGG TGAATTGACC TTATACAGTT ACCTGATGAT AGCCTTGCCG
TCGATGGTGA TGATGATGGG GATTTTTTAT TATTTATGGC GCACTATTCG TGATTTAACT
GGGCTTAAGT TGGAAGAGGT TTTGGCCAAT CAGTAA
 
Protein sequence
MSSTSTHKPR PMVDLLVSIV IPAFILMKLS GDDQLGASGG LMLALSFPLG WGIFELIKYR 
KFNFIALLGL ANVMLTGGIG LLELDLKWLA IKEAAIPAAI GIAVLISTFT SKPLIKALVF
NPAVMDVDKI MKRLQQNNCM AAFEQRLMTA TYLVAGSFAF SATMNYVLAK WLVTSPTGTP
EFNAELGELT LYSYLMIALP SMVMMMGIFY YLWRTIRDLT GLKLEEVLAN Q