| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0869 |
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| Symbol | |
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| ID | 6115103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1161144 |
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| End bp | 1162136 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632353 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001759258 |
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| Protein GI | 170725232 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCCTG AAAATATTGA TACCAGTATC AGTCTGCTCG AAAGTGATAA TACTCAGTTA
AACTTAGTTC GATGGATGCA TCAATGTGAA TTAATGCATC GCTACTATGA GTCAGATGTG
GTGTTTGTCA TTCAGCAAAC AGGTCAAGGG TTTGAGATTA TAGTAAGCTC GATTAGTGAA
GCTAGGTGTT TTACCACTGG AACCCTATTC GAAAAAGAGA CCCCTGTTTT TCAACGTTTA
GTCCATACAC CACCGGAAGG GTTATATATC GATCTAACCA GTCAAAAGTC ACAAGACTTA
CCTAAAGACT TTAACGAAGC AAACAGCATG TTAACCCGCC CCATATTGTG GCCTGACGGC
ACCCATTTCG GCTGTATCTG TGTTTTAAAC TCCAGAACAA CTAAAAGCGA AACGGATGCA
TTTATGCTTG AACCATTTCA GGTGCTACTG CAACAGGAGC TCTCACTCTA CTGCCAGACC
CAACGCATTG AGTCTCTGTC CATGAGAGAC AAGGATACAG GCATGCTAAA TGAGTATGGG
TTTATCATGA TGGCACCCAG ACAATTGAGC CTAGGAAGAC GATTTGGTGC TCATGCAGGG
ATTATTTTCT TTGAATTACT GCCTGATCCG TTAATCAAGC AAATTCAAGA ACATCACAAC
CGATTATTAG GCAAGATAAT TCAAGATACC ATACGCACAG CAGATATTGC GGCTCACTAC
GATGAGTCAC AATTTGTGGT GCTAGTATTT ATCGATTCAG AGCGCGACCT TCTTCATATA
TCTCAACGTG TTGAGAAACT TCTCTATCAA CAGAATGAAA GCCTCAAAAT TGATGTTAGC
TGTAACTTCT TTACACCCGA TTCATCACTA AAGCTCTCCC CCATGATTGA AGAGTCTAAA
AAAGGGTTAA AATCGGAACA GGAAAAGCAA GAAGCTCAGC TCGCAATATT GGAGCAGGAA
ACCAGAGATG AGGCCAGCAA CACGCTTTCA TAG
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| Protein sequence | MLPENIDTSI SLLESDNTQL NLVRWMHQCE LMHRYYESDV VFVIQQTGQG FEIIVSSISE
ARCFTTGTLF EKETPVFQRL VHTPPEGLYI DLTSQKSQDL PKDFNEANSM LTRPILWPDG
THFGCICVLN SRTTKSETDA FMLEPFQVLL QQELSLYCQT QRIESLSMRD KDTGMLNEYG
FIMMAPRQLS LGRRFGAHAG IIFFELLPDP LIKQIQEHHN RLLGKIIQDT IRTADIAAHY
DESQFVVLVF IDSERDLLHI SQRVEKLLYQ QNESLKIDVS CNFFTPDSSL KLSPMIEESK
KGLKSEQEKQ EAQLAILEQE TRDEASNTLS
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