| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0864 |
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| Symbol | |
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| ID | 6115098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1156962 |
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| End bp | 1158329 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632348 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001759253 |
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| Protein GI | 170725227 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGCG CATTTGATAT TTTTAAGATA GGTGTGGGTC CATCCAGCTC GCACACTGTC
GGGCCGATGA AGGCCGCCAA AGAGTTTGTT GATGAGTTAC GTCAACGTGG AGATATGACA
AAAGTAACCC GTGTTAGTGT TGATATTTAT GGTTCACTTT CACTCACTGG TAAAGGTCAC
CACACAGATA CAGCTATCTT AATGGGATTA GGTGGAAACC TGCCTGAGAG TGTTGATATC
GAGGCGATTC CTGAGTTTAT CCGTCAGATT GAAACCACTG AAACCTTACC ATTAGGAAAA
GAGGCCAAAA GTGTTGCGTT TCCTACAGGT TCCGTGACCT TTCATGCTTA CGCACTACCG
CTACATGAAA ACGGTATGTC TATCCATGCT TGGGATGGTG ACACTAGCTT ATTCTCTAAA
ACTTACTACT CAACCGGTGG TGGTTTTATT GTTGATGAGG AGCATTTTGG TTTAGAAGCG
GCTAATGAGG TGATGGTTCC ATATCCGTTT GCCTTTGCTG ACGATCTGCT TGCTATCTGC
AAAGAGACTG GCATGAGTAT CAGTGCTGTT ATGTTGGCCA ATGAGAAGGC TTTTAATAGC
GAAGCGGTGA TCTATGAGCG TTTAGGTGCG ATCTGGGACA CCATGAAGTC AGGTATCGAG
AGAGGCTGTC AGACTGAGGG GATCCTTGCC GGTCCACTAC GTGTGCCGCG CCGCGCTCCT
GCACTGTACC GCCAACTTGT TACTGGTGAG CGTCACTCAT CTGATCCTAT GGCTATTTTA
GACTGGGTCA ATATGTTTGC CTTAGCGGTA AGCGAAGAGA ATGCTGCTGG CGGACGCGTG
GTGACGTCAC CAACTAACGG TGCTGCGGGC ATTATTCCTG CTGTGATGGC TTATTACGAT
AAGTTCATTC AGCCAATGAC TCAGTCTGAG TACACCCGTT TTTACATGGC AGCGTCTGCG
ATTGGTAATC TGTATAAGCG CAACGCGTCT ATCTCTGGTG CCGAGGTTGG TTGTCAAGGG
GAGGTCGGCG TGGCTTGCTC TATGGCGGCA GCTGGTTTAG CCGAGATTAT GGGGGCTACA
CCATCTCAAG TCTGTATTGC GGCTGAGATC GGTATGGAGC ATAACTTAGG ACTGACTTGT
GACCCGGTTG CAGGCCAAGT TCAAGTGCCA TGTATCGAGC GTAATGCTAT TGCGTCTGTT
AAAGCGATTA ACTCATCGCG CATGGCGATG CGTCGCAGCA GTGAGCCTAC AGTGAGTTTA
GATAAAGTTA TCGAGACCAT GTATGAAACT GGTAAAGATA TGCACGTTAA GTACCGTGAA
ACCAGCCAAG GCGGTTTAGC GATTAAAGTG ACCAGTATCT GCGCGTAA
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| Protein sequence | MFSAFDIFKI GVGPSSSHTV GPMKAAKEFV DELRQRGDMT KVTRVSVDIY GSLSLTGKGH
HTDTAILMGL GGNLPESVDI EAIPEFIRQI ETTETLPLGK EAKSVAFPTG SVTFHAYALP
LHENGMSIHA WDGDTSLFSK TYYSTGGGFI VDEEHFGLEA ANEVMVPYPF AFADDLLAIC
KETGMSISAV MLANEKAFNS EAVIYERLGA IWDTMKSGIE RGCQTEGILA GPLRVPRRAP
ALYRQLVTGE RHSSDPMAIL DWVNMFALAV SEENAAGGRV VTSPTNGAAG IIPAVMAYYD
KFIQPMTQSE YTRFYMAASA IGNLYKRNAS ISGAEVGCQG EVGVACSMAA AGLAEIMGAT
PSQVCIAAEI GMEHNLGLTC DPVAGQVQVP CIERNAIASV KAINSSRMAM RRSSEPTVSL
DKVIETMYET GKDMHVKYRE TSQGGLAIKV TSICA
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