Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0863 |
Symbol | |
ID | 6115097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1155614 |
End bp | 1156885 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641632347 |
Product | aromatic amino acid permease |
Protein accession | YP_001759252 |
Protein GI | 170725226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGAAG AAGTGATGAA TACCCAAGTA GAATCATCTA GCCGTCAAGG TTGGACACGT CAGGATACAA CTTGGATGTT AAGTTTATTT GGTACAGCGG TCGGTGCCGG TATTCTTTTC CTACCTATCA ACGCAGGGAT GGGTGGTTTC TGGCCACTTG TAATGATGGC GATAATTATC GGTCCTATGA CCTATTTAGC CCATCGCGGT TTATCTCGAT TCGTGTGCTC TTCACAGAAG CAGAGCAGCG ATATTACTCA CGTGGTTGAG GAGTATTTTG GTGTTGGCGC TGGTAAGGCA ATTACATTGC TCTACTTCTT TGCTATCTAC CCGATTGTAT TGATCTATGG TGTTGGTATC ACAAACACTA TCGATAGCTT CATTGTTAAT CAGCTTGGCA TGGCATCGCC ACCACGTTGG TTGCTATCTG GTGTACTTAT TCTTGCCATG ATGTCTGTAA TGGTATCGGG TGAGAAGCTA ATGTTGAAGG TGACTCAGTT CCTGGTTTAC CCGCTTGTGG CTATTTTGGC ATTTATGTCT CTATACCTTA TTCCAAGCTG GAAGATGGAT GCACTGACTC AAATTCCTAC AACAGGTGAG TTTTTAGGTA CTGTTTGGTT AACCATTCCA GTATTGGTAT TTGCTTTTAA CCACTCACCA GCGATTTCAC AGTTCTCAGT TTCATTGAAG CGTGAGCACG GTGTTAATGC GGCTAAGAAG GCGGATGTTA TTCTTCGTAA TACATCTATG ATGTTAGTTG GTTTTGTTAT GCTGTTTGTA TTCTCTTGCG TGCTTTCATT AAGCCCAGCG CAACTTGCAG AATCTAAAGC GCAAAACTTG CCAATTCTTT CTTACTTAGC GAACGTACAC GCCAGTGGTT TCGTTAGTTA CTTTGGTCCT ATCATTGCTG TGATTGCCAT TGTATCTTCT TTCTTCGGTC ACTACTTAGG TGCGACTGAA GGTCTGAAGG GAATTATTAC TAAGCAGTTA CGTAGCAGCA ATAAAGAAGT ATCTGACAAG AAAATTAATA AGTTTATTCT TGGCTTTATG TTCTTCACCA TTTGGGGGGT TGCGATTATT AACCCAAGCA TCTTAGGTAT GATTGAAGCG TTAGGTGGTC CAATCATCGC TGCGATTCTT TACCTGATGC CAATGTACGC CGTTTATAAA GTGCCAGCTC TTAAGGCATA CCGCGGTCGT ATCAGCAACA TCTTTGTGAT TATTGCCGGC TTGTTAGCGA TGACTGCTAT CCTGTTCGGT ATGATGTCTT AA
|
Protein sequence | MQEEVMNTQV ESSSRQGWTR QDTTWMLSLF GTAVGAGILF LPINAGMGGF WPLVMMAIII GPMTYLAHRG LSRFVCSSQK QSSDITHVVE EYFGVGAGKA ITLLYFFAIY PIVLIYGVGI TNTIDSFIVN QLGMASPPRW LLSGVLILAM MSVMVSGEKL MLKVTQFLVY PLVAILAFMS LYLIPSWKMD ALTQIPTTGE FLGTVWLTIP VLVFAFNHSP AISQFSVSLK REHGVNAAKK ADVILRNTSM MLVGFVMLFV FSCVLSLSPA QLAESKAQNL PILSYLANVH ASGFVSYFGP IIAVIAIVSS FFGHYLGATE GLKGIITKQL RSSNKEVSDK KINKFILGFM FFTIWGVAII NPSILGMIEA LGGPIIAAIL YLMPMYAVYK VPALKAYRGR ISNIFVIIAG LLAMTAILFG MMS
|
| |