| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0859 |
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| Symbol | |
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| ID | 6115093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1150861 |
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| End bp | 1152072 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641632343 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001759248 |
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| Protein GI | 170725222 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC ACCACCTGCG CGCTCAATTC CCCACCTTAG AGCAGACTTT AGCTGGTTAC
CCACTGTGCT ACCTAGATAC CGCAGCCACC AGTCAAAAGC CTAAGCAAGT GCTCAACGCC
ATGGCCCGAT ACTATGAAAA CGATAACGCG AACGTCCACC GTGCAGCGCA TCAGCTATCA
TCCCGCGCAA CCAGTAATTA CGAGACAGTG CGCGATAAGG TGTGCCATTT TATCAAGGCT
AAACAGCGTG AAGAGATCAT CTTTACCCAC GGCACCACAG AGTCGATAAA CTTAGTCGCC
TACGGCTTAA CTGGGCAGAT AAAATCAGGA GACCTCATCC TTATCGACAC CGCAGCCCAT
CACGCCAATA TCGTCCCTTG GCAGGAGCTG GCCAAACGCA CTGGTGCCAT CATTAAGCCA
ATCCCCTTAG ACAGTGAGTG CCGTCTCGAT GAGACCGCCT ATGAGCATCT ACTGCAAGAA
AACCCTTTCA TTGTTGCCCT GAGCCATGTA TCCAACGCCT TAGGTACGCT TAATCCCGTT
AACCGGCTCG TTGCGCTTGC AAAGCAGGTT GGCGCCATCA CCTTAGTCGA TGGCGCTCAA
GCTATCGCGC ATCTAGATGT CGATGTCCAA GCAATAGGCT GTGATTTTTA TGTCTTCTCC
GGCCATAAAA TGTATGGCCC CACAGGCGTA GGCGTGCTTT ACGGGCGCTT CGATATTCTG
GACAGCTTAA TGCCACTGAT GACAGGTGGA GAGATGATAA AGACCGTAAG TTTCGAAGCC
ACCGAATTTA ACCAGCTGCC AAACCGGCTC GAACCGGGCA CGCCGCCTAT TGCAGAGGTG
ATAGGCTTAG GCGCCGCTAT CGATTTTCTT AGTGCACTCC CAAGAGAGGT CATTGCCAAG
CAGGAAGCTG AGCTACTTAG CTACCTTCAA ACTCAGCTGA AACAGCTGGG CGACATCACA
CTCTATGGTG CCAACACCAG CAATATCGGC GCAGTGGCGT TTAATCTTGC CGATGAGCAT
CATCAAGATG TGGGAATACT GCTCGACCAG CAAGGCATTG CCGTTCGCTG CGGCCATCAC
TGCGCTATGC CGTTAATGCA AAGTTTGGGA CTCAAGGGCT GCTGTCGCGC CTCACTCGGT
GTATATACCA GTAAAGAGGA TATCGACCGT TTTATCGAAG CGATGGCATC GGTGAAAGAG
ATGTTGTTGT AA
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| Protein sequence | MDFHHLRAQF PTLEQTLAGY PLCYLDTAAT SQKPKQVLNA MARYYENDNA NVHRAAHQLS
SRATSNYETV RDKVCHFIKA KQREEIIFTH GTTESINLVA YGLTGQIKSG DLILIDTAAH
HANIVPWQEL AKRTGAIIKP IPLDSECRLD ETAYEHLLQE NPFIVALSHV SNALGTLNPV
NRLVALAKQV GAITLVDGAQ AIAHLDVDVQ AIGCDFYVFS GHKMYGPTGV GVLYGRFDIL
DSLMPLMTGG EMIKTVSFEA TEFNQLPNRL EPGTPPIAEV IGLGAAIDFL SALPREVIAK
QEAELLSYLQ TQLKQLGDIT LYGANTSNIG AVAFNLADEH HQDVGILLDQ QGIAVRCGHH
CAMPLMQSLG LKGCCRASLG VYTSKEDIDR FIEAMASVKE MLL
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