Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0844 |
Symbol | |
ID | 6115078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1132409 |
End bp | 1134349 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641632329 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001759234 |
Protein GI | 170725208 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TAATTAGTTC AATTATCTTT CTGCTTTGTT TTTTCACCAC TCAAGGCTTT GCAGAGATTC TGCCACTAGA GTACTTTGCT AAGCCTGCAC AATTCACTAG CATTAAGCTC TCCCCTAACG GCAAGTACTT TGCAGCTACA GTACCAAAAG AGAATACCAA TGCTCTTATT GTTGTTGAAC GTAAGAGTAA TAAGAGACTT ATCGCCTATG GCTTTGGCCA TAATGAATAT ATTGGTGACT TTTACTGGGG CAATAATGAA CGTTTGGTTT ATACCAAAAG TTACAAAAAA CAAGGTTATG AAAGAAAAGG TTATAAAGGA GAGATATTTG CCGCCAATAT TGATGGTAGT AAACGCACTC AGCTATATGG CTTCAGCAAA AGTGAGGGTA GCTCTAAGCG CGGTGAGATA GCCTCTAAAC GTGGTGAAAG AGCCTGGGGC TATATTGTCC AGATGCTCAC CAATGATGAC AAACATATTC TAATCCGTTC TTCAAAGTGG AACACTGACA GAGACGCTCC AGATAAACTC TATAAGATTA ATATCTACAA TCAGAAAAGA ACTCGAATTG CTACCACGCC TCTAGGTAAT ATCAGCGTCG TTACCAATAG TGATGGCATT CCTGTTATTG CCAAAGGTAA AGATAGAAAA GGAAAAACTA AACGTTTCAC CTACAAAAAT GGTGATTGGC AGGAGATAAC AAAAGATAGC CCTCTTTCAG GCTATTCATA TAAATCACTA AGCAATGACG GAAAGCTGCT CTACATGAGT AAAGCCGTGA AAGGTGAGAC ATCAGGCTTA TATGAATACA ACTTTGAAAC CAAAAAGGTA AAGTTGCTCT TCAATCATCC CGTTGTTGAT ATCAACGCCT ATGTGCGCTC CCCCGATAGC AGAAATATTA TTGCCGTTGA AACAATGATG GACGGCATGA AATACCACTA CTTAGACAAA TCACCTTTTG CACTCATTCA TCAACAGATA GCAGCAAGTT TTCCCCAAGC AGATATCAGT ATCAGGGCAA ACAGTATTCA TGATGAGGAG ATGATAGTAA AAATCATCAC AGACAGGAAC CCTGGTGACT TCTACCTCTT CAACCAGAAA AAGAAGACAC TAGACTACCT ATTAAGTGCC AAGCCCTGGA TCTATCCAGA GCAGATGCAA AACAGGAAGC TTATCCATTT CGATTCCCGT GATGGCCAGA AAATCCATGG CTATCTGACT TTACCAAAGC CCAGTGATAA ACCCCACCCT CTCATTGTCG ATGTTCATGG TGGTCCTTAC GGCCCTATGG ATAAGTGGCA TTACGACAGT GGCGCTCAAA TGTGGGCTAA CAACGGATTT GCCGTGCTGC AGATAAACTT TAGAGGCTCG GGTGGATATG GCAAAAGATT CAAAGAGTCT ACTTACTTAG AACGGAGCAC AACGATCCAA CATGATATTA TCGATGGTAC TCGCTGGGCT TTGGGTTTAA AAAACATTAG CGATGATAAA GTTTGTATCA CTGGTGGCAG TTTTGGTGGC TACTCTGCAT TGATGTCCGC GCTCATGGAG CCTGAACTCT ACAGATGCTC TATCCCTATG TATGGTGCCT ATGATCTGGT TTATCAGATG AAACATGCTG ACTATATGGA TGGCAGTTCA GTCTCAATCG GTGCGATGGA AAAGTATGGT GATAATGAGG AGCACTGGCG AAAAGAGTCA CCTCTGACTT ATATAGACAA GCTAAAAACC CCATTAATGA TAGTCACTGG GGGCAGAGAC AAACGGGTTC CCCCACAAAG CGCATTACAC CTTCAAGAAG CACTCGACAA ACGTAATATC AGCTATGAAT GGCTCTATAA AGCTAAAGAG GGACATGGCT TTGTTAATAC TGATAATCGA GTTGAGCTTT ACCAAAAAAG TCTGGCCTTT GCCCGTAAAC ATATTCAATA A
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Protein sequence | MKKLISSIIF LLCFFTTQGF AEILPLEYFA KPAQFTSIKL SPNGKYFAAT VPKENTNALI VVERKSNKRL IAYGFGHNEY IGDFYWGNNE RLVYTKSYKK QGYERKGYKG EIFAANIDGS KRTQLYGFSK SEGSSKRGEI ASKRGERAWG YIVQMLTNDD KHILIRSSKW NTDRDAPDKL YKINIYNQKR TRIATTPLGN ISVVTNSDGI PVIAKGKDRK GKTKRFTYKN GDWQEITKDS PLSGYSYKSL SNDGKLLYMS KAVKGETSGL YEYNFETKKV KLLFNHPVVD INAYVRSPDS RNIIAVETMM DGMKYHYLDK SPFALIHQQI AASFPQADIS IRANSIHDEE MIVKIITDRN PGDFYLFNQK KKTLDYLLSA KPWIYPEQMQ NRKLIHFDSR DGQKIHGYLT LPKPSDKPHP LIVDVHGGPY GPMDKWHYDS GAQMWANNGF AVLQINFRGS GGYGKRFKES TYLERSTTIQ HDIIDGTRWA LGLKNISDDK VCITGGSFGG YSALMSALME PELYRCSIPM YGAYDLVYQM KHADYMDGSS VSIGAMEKYG DNEEHWRKES PLTYIDKLKT PLMIVTGGRD KRVPPQSALH LQEALDKRNI SYEWLYKAKE GHGFVNTDNR VELYQKSLAF ARKHIQ
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