| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0842 |
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| Symbol | |
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| ID | 6115076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1130415 |
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| End bp | 1130996 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632327 |
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| Product | hypothetical protein |
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| Protein accession | YP_001759232 |
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| Protein GI | 170725206 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATTTAA GCTCAAAGAA ACAAAAAGGC TTTACCTTAA TCGAACTCGT GGTTGTGATT
ATTATTTTAG GGATCTTAGC CGTTATCGCC CTTCCGAAAT TTATCAATCT CAATAAAGAG
GCCGACTCTG CGCTGGTCAA ACAACACATG AGCGCTATCC TTGCTGGCAA AACCCTATTT
CACAGTAAAT GGAATATAGA TCAACAGCCA AGCACAGCTT TCTCTATCTA TCAAAGTACG
CCCAGCGAAC TTGGATTCCC GGCCGGCGGC GATATCCTAG ATGAAGCATT TGAAAGTGAT
TGCAGCCTTA TCTGGCACGA TATGGTTGAA GATAAGGAGC CGCTAAACTT TATCTCTGGT
AGTAACGGAT GGCAGAGTAG CCATGTTAAA AGTGAGTGGT CACGAAATGC AGGTGTGCTC
CCCCAGCTAG GTGAGACCCA AGATAACTAC TGCCACTTTG TCTACACTGG CGGCTTTTAT
AACGGCAGTT TCAGTGGCTT TCCTGATGAT AGGCTCCTTA CAATCCAATA CAATATCGTT
AGCGGAGAAA CCAAGTTACT AAGCTGGCCC TATTCACCTT AA
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| Protein sequence | MYLSSKKQKG FTLIELVVVI IILGILAVIA LPKFINLNKE ADSALVKQHM SAILAGKTLF
HSKWNIDQQP STAFSIYQST PSELGFPAGG DILDEAFESD CSLIWHDMVE DKEPLNFISG
SNGWQSSHVK SEWSRNAGVL PQLGETQDNY CHFVYTGGFY NGSFSGFPDD RLLTIQYNIV
SGETKLLSWP YSP
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