| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0811 |
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| Symbol | |
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| ID | 6115045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1094826 |
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| End bp | 1095716 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632296 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759201 |
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| Protein GI | 170725175 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AATTGCAGCA GTTAAGGTAT TTCTCTCTCG TGGCGGAAAA AGGGGGATTT
AGGGCGGCAT CGGATACGGC AAATCGCTCT CAGGCGGCTC TGTCTACCTC AGTAAAAGAG
TTAGAAAAGA TACTGGGACA AGCCCTGTTT GATACGGGTC ATAAGGCGCA ACTAACTCCC
TATGGCGAAG TCTGTTTGCC TATGGTTAAT CAATTTTTAA ACCTATACCA ATCATTGGAT
AGTGACCTTA GAGCCGCGGC TAAAGGGGAG TTTGGCCGTT TAAAAATTGC CTCTGTCCCC
TCTGTTGCAG CCAAACTGCT ACCAAAGGTG TTGGCGGCTT TTTGCAATAA TCACCCGGAA
GTTCAAGTAT CGCTAATCGA TGATAATGCG GTAGGCATTG AAAAAAGGTT GCTCGCCGGA
GAGGTTGATC TGGCACTGGG AAACTGCCTA CATGCTAGCG ATCATCGAAT TGAGTTTTCA
CCTCTGTTTA CCGACCCTCT AGGCCTCGTT TGCCAAAAAG ATCATCCACT TGCCAGCAAG
CATCAGGGGG TCGATTGGAC CGATATCATT CCATTTCCTT TTATCAAAAA TGGCACCTGT
CGACTGCTTG CCACCACACC AGCTGCAGTA TTAGCCGAAC AAGCAAACTA CGACGTTGAA
AATATCACTT CACTATTTTC AGTCCTCGAA TTAGGTGTGG GTGTTACCAC CCTCCCCAAA
CTAGCCTTCC CCATAGAAAA CAAAAACTTA GTTTGGATCC CCTTAAAACG ACCTTTTATT
GAACGAGAGA TAGGGATCTT CCGCTCCATA GAGCGTCACC TATCACCACA AGCAGACGCC
TTTTTACAGC TTTGCCAAAC CCAGTTCGAA GCCTGTAATA CCCAACTCTA G
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| Protein sequence | MDIKLQQLRY FSLVAEKGGF RAASDTANRS QAALSTSVKE LEKILGQALF DTGHKAQLTP
YGEVCLPMVN QFLNLYQSLD SDLRAAAKGE FGRLKIASVP SVAAKLLPKV LAAFCNNHPE
VQVSLIDDNA VGIEKRLLAG EVDLALGNCL HASDHRIEFS PLFTDPLGLV CQKDHPLASK
HQGVDWTDII PFPFIKNGTC RLLATTPAAV LAEQANYDVE NITSLFSVLE LGVGVTTLPK
LAFPIENKNL VWIPLKRPFI EREIGIFRSI ERHLSPQADA FLQLCQTQFE ACNTQL
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