Gene Swoo_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0796 
Symbol 
ID6115030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1077950 
End bp1078621 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID641632281 
ProductDSBA oxidoreductase 
Protein accessionYP_001759186 
Protein GI170725160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTAAAC ATATCGCATT AGCGCTAACA TTAGCCATAG CACCATTGAG CAGCTTTGCC 
TCACAGTTTG TTGAAGGTAA GCACTTTACC CAGGTCTCTA ACAAGGCAGC AAGCACTCAA
CCTAAATTGA CTGAGTTCTA CTCATTTTAC TGCCACAACT GTTACAACAT GGAAACTCAA
TACCTAGGCG ACATCAAAGC TAACCTAAAT AAGAAGGTCA AGTTTGATAG TAAGCATGTT
GATTTCATGA ACAGTGAAAT TGGTACCGAA GTGATGCGCT CTCTTGGGGT GATCCAAGCA
TTAGATGCAA GTCAAAAAGA TAAACTAACT CTCGCTATGT TTGCCGCTAT TCAAGGGGAA
GAAGAGGCTG GTAGTCATGA CCACGCCCAT GATCACAGCG CCCATGATAA GCCTGAATTA
AACAACCGTG ATGACATCAA AAAGGTCTTC GCAGCACATG GTATCGACGG TAAAAAGTAT
GACGAGCTAG CAGACAGCAA AGTTGTCGAT AGCAAGCTAG CACTTTGGCG TGTTCAACAA
AGAGAGTTCC GCGTTCAGAG TGTTCCAGCG TTTATCGTCA ACGATAAGTA CGCCATCAAC
ATGGGTGAGA TCCGCTCTTT AGGGCAACTG ATTGATCTCA TCAACTACTT GGCATTAGAC
CACAAGTCTT AA
 
Protein sequence
MIKHIALALT LAIAPLSSFA SQFVEGKHFT QVSNKAASTQ PKLTEFYSFY CHNCYNMETQ 
YLGDIKANLN KKVKFDSKHV DFMNSEIGTE VMRSLGVIQA LDASQKDKLT LAMFAAIQGE
EEAGSHDHAH DHSAHDKPEL NNRDDIKKVF AAHGIDGKKY DELADSKVVD SKLALWRVQQ
REFRVQSVPA FIVNDKYAIN MGEIRSLGQL IDLINYLALD HKS