Gene Swoo_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0788 
Symbol 
ID6115022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1068787 
End bp1069620 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content46% 
IMG OID641632273 
Producthypothetical protein 
Protein accessionYP_001759178 
Protein GI170725152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.9656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAT TAGTAAAAGT AACCGAGACA AAGTCGGCTC AATCCGATGT GTCGGCCCGT 
AAAAAAGCAC TCCTATTGGG TCGACAATTA GGCTTAAGTA GTGAAGATGA TTATCGACCA
GGCAGTGCAT CTATTGCTGA GCGAGGGGAG CACAGGCAGC GTAAACAGCT TAGCCAGTAC
CAAACAAACC TTGAGACCAT CTACGCTATC GCCTTAACCC ATGCGCCATC AGATGTCACA
GGAGTTGATC TAGACCCTGA TTGGGCCCAT CAATTTTTTC AGCTTGCAGA GCAGATCCAT
AACCGTAAAA TGCAGGAGTT ATGGGGGCGC ATCTTAGCCA ATGAGATCAC CAACCCTGGT
AACTTTAGCC TACGTACTCT CTCGACACTA AAGCAGCTGA CCCACAAAGA GGCACAGATA
TTAGAAAAAG CCTTGGGAAT GGCGATAAAA GTGAATGGTG AAGCAAGATT AAAGCTGATC
TATGGTTACC GCTATACAGG AGGGTTTGGT CAGATATTTC GTAAATCTGC GCCAATCAAT
ATTGGTTTAT CTAATTTTGG TCTGCCCTAC TCCAACATTT TGACCTTAGT TGATGCAGGG
GTCCTCCATC GCGGAGAGTT TGAGACTGGC TTGCTAAATA GTAAGAATCC CATCAACTTT
ACTCTGCTTT CAGAGACCAT GAAGCTGACA CCTAAAAGCG GCCATCTGCT ATTTAACTAC
TACCGCTTAA CACCGATAGG TGACGAGCTG ACTCAGCTCA TTCAGCCCAA GCCAGATCCT
GAATACGCTA AGACAGTCCG CACTCTGTTT GCCAAGGATT TTAAGATTGA GTAG
 
Protein sequence
MAELVKVTET KSAQSDVSAR KKALLLGRQL GLSSEDDYRP GSASIAERGE HRQRKQLSQY 
QTNLETIYAI ALTHAPSDVT GVDLDPDWAH QFFQLAEQIH NRKMQELWGR ILANEITNPG
NFSLRTLSTL KQLTHKEAQI LEKALGMAIK VNGEARLKLI YGYRYTGGFG QIFRKSAPIN
IGLSNFGLPY SNILTLVDAG VLHRGEFETG LLNSKNPINF TLLSETMKLT PKSGHLLFNY
YRLTPIGDEL TQLIQPKPDP EYAKTVRTLF AKDFKIE