Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0788 |
Symbol | |
ID | 6115022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1068787 |
End bp | 1069620 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632273 |
Product | hypothetical protein |
Protein accession | YP_001759178 |
Protein GI | 170725152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.9656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAT TAGTAAAAGT AACCGAGACA AAGTCGGCTC AATCCGATGT GTCGGCCCGT AAAAAAGCAC TCCTATTGGG TCGACAATTA GGCTTAAGTA GTGAAGATGA TTATCGACCA GGCAGTGCAT CTATTGCTGA GCGAGGGGAG CACAGGCAGC GTAAACAGCT TAGCCAGTAC CAAACAAACC TTGAGACCAT CTACGCTATC GCCTTAACCC ATGCGCCATC AGATGTCACA GGAGTTGATC TAGACCCTGA TTGGGCCCAT CAATTTTTTC AGCTTGCAGA GCAGATCCAT AACCGTAAAA TGCAGGAGTT ATGGGGGCGC ATCTTAGCCA ATGAGATCAC CAACCCTGGT AACTTTAGCC TACGTACTCT CTCGACACTA AAGCAGCTGA CCCACAAAGA GGCACAGATA TTAGAAAAAG CCTTGGGAAT GGCGATAAAA GTGAATGGTG AAGCAAGATT AAAGCTGATC TATGGTTACC GCTATACAGG AGGGTTTGGT CAGATATTTC GTAAATCTGC GCCAATCAAT ATTGGTTTAT CTAATTTTGG TCTGCCCTAC TCCAACATTT TGACCTTAGT TGATGCAGGG GTCCTCCATC GCGGAGAGTT TGAGACTGGC TTGCTAAATA GTAAGAATCC CATCAACTTT ACTCTGCTTT CAGAGACCAT GAAGCTGACA CCTAAAAGCG GCCATCTGCT ATTTAACTAC TACCGCTTAA CACCGATAGG TGACGAGCTG ACTCAGCTCA TTCAGCCCAA GCCAGATCCT GAATACGCTA AGACAGTCCG CACTCTGTTT GCCAAGGATT TTAAGATTGA GTAG
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Protein sequence | MAELVKVTET KSAQSDVSAR KKALLLGRQL GLSSEDDYRP GSASIAERGE HRQRKQLSQY QTNLETIYAI ALTHAPSDVT GVDLDPDWAH QFFQLAEQIH NRKMQELWGR ILANEITNPG NFSLRTLSTL KQLTHKEAQI LEKALGMAIK VNGEARLKLI YGYRYTGGFG QIFRKSAPIN IGLSNFGLPY SNILTLVDAG VLHRGEFETG LLNSKNPINF TLLSETMKLT PKSGHLLFNY YRLTPIGDEL TQLIQPKPDP EYAKTVRTLF AKDFKIE
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