| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0777 |
|---|
| Symbol | |
|---|
| ID | 6115011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1056779 |
|---|
| End bp | 1058563 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641632262 |
|---|
| Product | sulfite reductase subunit beta |
|---|
| Protein accession | YP_001759167 |
|---|
| Protein GI | 170725141 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCC ATGATGCGCT GCACAGTAAA GAATTGAGTG AGGCTGCGGC TATGTCAGAT
GGTAAGAGTG TAGAGAAAGA AGAAGCGTTA TCTGTAAATG AACACCTGAA AACAGACAGT
GATTTTCTGC GTGGAACGAT TCAAGAGGGG CTAGATACCG CGGTAACTGG CTCGTTTAGC
GAAGGAGACC AGCAACTGAT TAAGTTTCAT GGTTTCTATC AACAAGACGA TCGTGATCTG
CGTAATGAGC GTAAAGAGCA GAAGCTTGAG CCTCTCTACA GCTTCATGTT GCGTGCACGT
GTTGCTGGCG GTGTTTGTAG CCCTGAGCAG TGGCTGGGTG TTGATGAGAT CTCATCAACA
TTGACCAGCT CAAACAGTAT TCGTTTAACT ACACGCCAGA CATTTCAATA TCACGGGATC
TCTAAGCGTA ATTTGAGAAC GCTGATACAG GGGCTCGATA GTAAGGCGCT TGATTCTATC
GCTGCCTGTG GTGACGTTAA CCGTAATGTA ATGTGTAATC CAAATCCTGT TGAGTCGCGT
CTCCATGAGC AAGCATATTA CTGGGCGAAA CAGCTATCTG ATCAGTACCT TCCTCGCACT
AAAGCCTATG CGGAGATCTG GTTAGGTGAT GATAAGGTTG CGACCAGTGA AGGGGATGAT
GTTGAGCCTG TATATGGTAA AACCTATCTG CCGCGTAAAT TTAAGATGGC CGTTGCCGTG
CCGCCAGATA ACGATGTTGA CGTTTACACC AATGACTTAG GTTTTGTTGC CGTTGCCGAA
GAGGGTGAGT TGGTTGGTTT TAACTTAGTT GCCGGTGGTG GTATGGGCTC GACCCACGGT
GAAGTACAAA CTTTTCCCCG TCTAGCCGAT GATTTTGGCT TTATTAAGGC TGAAGATACG
CTGAAATTTG CCGAGGCTGT TTTGAAGGTG CAGCGTGACT GGGGTAACCG CTCTAATCGT
AAACTTTCAA GGCTTAAATA CACCATAGTT AAATATGGTT ATGAAGCATT TAAAGCAGAA
GTTGAGAAAC GCGCTGGGGT GAAGTTTGAG CCTAAGCGTG ATGTGGTGAT CGGTGATCGC
GGCGATCGCT ATGGCTGGAT AAAAGGGGTG GACAATAAGT GGCACCTGAC CCTGTTTATT
GAGGGCGGTC GAATTAAAGA TCTGCCAGGT CAACCGCTGC AAACTGGATT AAGGGAGATT
GCTAAAATCC ATAAAGGCGA TTTCCGTATG ACCTCGAATC AAAACTTTAT CATCGCCAGT
GTGGCAGAGG AGGATAAAGC AGAGATCGAA GCCTTGGCGA GAAGTCATGG GTTGATGGGG
AAGTTGATAA CTGAAACCCG TGGTCGCTCT ATCGCTTGTG TTGCCCTACC AACCTGCGCC
CTTGCTATGG CTGAAGCCGA GCGTTATTTC CCAGACTTCC TCAGTAAGGT TGAGTCTCTG
CAGGAGAAGC ATGGCTTCCT TGACCAAGGA ATTGTGATTC GTATGACAGG TTGTCCAAAT
GGTTGTGCGC GTCCTTTTGC TGCCGAGATT GGCTTAGTGG GTAAGGCGCC AGGTCGTTAC
AACTTGTACC TAGGTGCAAG CTTTGAAGGA ACACGTTTAA ACAAGTTATA CCGTGAAAAT
ATTCAAGAAG CTGAAATTTT ATCTGAACTT GATAGCTTGT TTGCCCGCTA TGTGGCTGAG
CGAGAAGAGG GTGAGACTTT TGGTAACTTC ACGGTACGCA TTGGTGCAGT GAGTGCGGTA
ATCGATGCCG CTAAGGATTT CCATGAGCAG CACAATCATG CCTGA
|
|---|
| Protein sequence | MQRHDALHSK ELSEAAAMSD GKSVEKEEAL SVNEHLKTDS DFLRGTIQEG LDTAVTGSFS
EGDQQLIKFH GFYQQDDRDL RNERKEQKLE PLYSFMLRAR VAGGVCSPEQ WLGVDEISST
LTSSNSIRLT TRQTFQYHGI SKRNLRTLIQ GLDSKALDSI AACGDVNRNV MCNPNPVESR
LHEQAYYWAK QLSDQYLPRT KAYAEIWLGD DKVATSEGDD VEPVYGKTYL PRKFKMAVAV
PPDNDVDVYT NDLGFVAVAE EGELVGFNLV AGGGMGSTHG EVQTFPRLAD DFGFIKAEDT
LKFAEAVLKV QRDWGNRSNR KLSRLKYTIV KYGYEAFKAE VEKRAGVKFE PKRDVVIGDR
GDRYGWIKGV DNKWHLTLFI EGGRIKDLPG QPLQTGLREI AKIHKGDFRM TSNQNFIIAS
VAEEDKAEIE ALARSHGLMG KLITETRGRS IACVALPTCA LAMAEAERYF PDFLSKVESL
QEKHGFLDQG IVIRMTGCPN GCARPFAAEI GLVGKAPGRY NLYLGASFEG TRLNKLYREN
IQEAEILSEL DSLFARYVAE REEGETFGNF TVRIGAVSAV IDAAKDFHEQ HNHA
|
|---|
| |