| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0774 |
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| Symbol | |
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| ID | 6115008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1052047 |
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| End bp | 1053129 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632259 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001759164 |
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| Protein GI | 170725138 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATGA GCTGTCCTGG CTGCAACAGC AGCAATATGA AGGTTTATGA CTTCCACGGT
GAGGAGGTAG ATAGCTGCCA AAGTTGCGGT GGGCTTTGGT TTGAGAACGG CGAGCTTAAT
GCTGCACTTT CGAGCGCGGA TAATGGCGAT AGCTGTGTGC GAGTTGAGGA GAGTCTAGGC
GAGCATTTGG GGGATTCTAA ACGTCACTGT CACCACTGTG ATGTGGGGAT GCAACATTAT
CACTTGATGC AGGGCTATCA AATTGAGGTT GATGTTTGCC ATAGCTGTAG TGGCTTATGG
ATTGATGAAG ATGAGAGAGT CAAAGTTGTA CAGTCTCCTT TAGTGAAGAG TCTGCTTGCT
GATTTAGATG CAAAAATTAG CGCAAAAACC TGGTTCTTTC AGTTTTTATC CCAGATGCCA
GTCGAGTTTA ACTTAAAGCC TAAATCTCGC CCGGTTGTCA CTTATCTCTT GCTGGCGTTG
AATATTCTAA TTTTTCTTGC ATACGGTTTC GACATGTCGA CTACCGATAC TGTATTTGAA
AACTTTGCCA TGCGATCAAA CGAGGTATTA GCGGGGCATC AGCCTTGGAC TTTGGTGAGC
CATATGTTCC TCCATGGTGA CTTTATGCAC CTAGTGGGCA ATATGTACTT TCTCTATGTT
GTTGGAGATA ACTTAGAAGA CGCTTTAGGG CGAGTGAAGT TTCTAGGTGT TTATCTTATT
TGTGGCTTTG CCGCAGCGGC AGCACAGATA GCATCAGATC CGGGTTCTGG CATCTATATG
GTCGGCGCCA GTGGTGCCAT TGCAGGGCTG TTTGGTATGT ACCTACTTTG GTTCCGCCAT
GCGAGTTTGA CCTTTATGTT TGTGGTCTAT CAGAAGAAAT TAAGCCCAAT GGCGTTTTTT
GCTATCTGGC TAGGTTTCAA TATTTTTGGC TTATTGATGG CGGGTCAAGG GGTGGCTTAC
TGGGCTCATA TTGGTGGCTT TGTTGCTGGT TTAATTATCG GCGCGGCATT AAAAGATCGG
GTGATGGAGT CTAACCCTAT CCTTGCCATG CTGAATGAGC CTGAGGTGAA GGTAGCACGT
TAA
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| Protein sequence | MIMSCPGCNS SNMKVYDFHG EEVDSCQSCG GLWFENGELN AALSSADNGD SCVRVEESLG
EHLGDSKRHC HHCDVGMQHY HLMQGYQIEV DVCHSCSGLW IDEDERVKVV QSPLVKSLLA
DLDAKISAKT WFFQFLSQMP VEFNLKPKSR PVVTYLLLAL NILIFLAYGF DMSTTDTVFE
NFAMRSNEVL AGHQPWTLVS HMFLHGDFMH LVGNMYFLYV VGDNLEDALG RVKFLGVYLI
CGFAAAAAQI ASDPGSGIYM VGASGAIAGL FGMYLLWFRH ASLTFMFVVY QKKLSPMAFF
AIWLGFNIFG LLMAGQGVAY WAHIGGFVAG LIIGAALKDR VMESNPILAM LNEPEVKVAR
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