Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0768 |
Symbol | |
ID | 6115002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1046845 |
End bp | 1047768 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632253 |
Product | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
Protein accession | YP_001759158 |
Protein GI | 170725132 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAGAAA AAGCGCAATT TTCAAATCAT CTCTTTCATC CAAAATTTTG GCTACTCTGG CTTGGTGTCG GCTTAATGCG CTTAACCCAA CTGCTGCCAT TATCGGCTCA GATGAAAATC GGGGCAGGGC TTGGACGTTT AGCAAAAAAG CTGCTCGGCA GCCGTGTTCA TACCGCCAAG CGTAATCTTG AGCTCTGCTT CCCCGATATG CCACAGGCAG AGCAGGAGGT ATTGCTGAAC AAAAACTTCG AGGAAACAGG TAAAGCTATC TTTGATACCA TCAACGCTTG GTGGTGGTCA GATGACAAAA TTCAGCGCCA TATGACCATA AAAGGTCAAG AGCATGTTGA GCAAACACTC AAGGATGGCA ATGGCGTGAT CCTTTTCGCC GTACACTGTT TACCTTTAGA GATGGGCGCA AGAATTTTTG GGCAGTTCCA ACCAGGAGTT GGAGTTTATC GCCCCCATAA CAACCCAGTG ATGGAGTACC TTCAGGTCAA AGGCCGTCTA AGGTCCAACA AGGCATTGGT GCCTAAGCGA GATATTCGCC AGATGGTTCG CTGCCTACGT AGCCCAGATG TTATCTGGTA CACAGCCGAT CAAGATTTTG GCCGCTCAAG TGCCACCTTT ATCCCCTTTT TCGCCATGCC CGATGCTGCC ACCATCACAG GCGCAACCAC CTTGGCTCGT TTAGGCAAAG CCAAAGTGCT CCCCTTTAGC GTCGAGCGAA ATACCGATGA TAAGGGTTAT ACCATTGAGA TCATGGCGCC ACTGGATAGC TTCCCCACTA AAGATGAGGT GGAAGATGCT AAACGCGGTA ATGGCATTAT CGAGCAGATC ATCAATAAAA ACCGCGCCCA ATATATGTGG TTGCACAGAC GATTTAAGAC ACGGCCTAAT GAGAGTGACC CATCGGTTTA TTAA
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Protein sequence | MVEKAQFSNH LFHPKFWLLW LGVGLMRLTQ LLPLSAQMKI GAGLGRLAKK LLGSRVHTAK RNLELCFPDM PQAEQEVLLN KNFEETGKAI FDTINAWWWS DDKIQRHMTI KGQEHVEQTL KDGNGVILFA VHCLPLEMGA RIFGQFQPGV GVYRPHNNPV MEYLQVKGRL RSNKALVPKR DIRQMVRCLR SPDVIWYTAD QDFGRSSATF IPFFAMPDAA TITGATTLAR LGKAKVLPFS VERNTDDKGY TIEIMAPLDS FPTKDEVEDA KRGNGIIEQI INKNRAQYMW LHRRFKTRPN ESDPSVY
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