| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0750 |
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| Symbol | |
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| ID | 6114984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1024352 |
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| End bp | 1025248 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632235 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001759140 |
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| Protein GI | 170725114 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA AATCATTCGA CTTCAACTGG GTACTACTCA TCATAGCCAT AGTGTTAGGT
AGTATTGCAG CTTGGGCGAC CAAAAATTAC TTCATCACGA AAGAGCAAGA GCTCATCGCA
GAGCTATCAA AAGATAATAT AAAGATGGCC CAAGTTGTCG TTGCGACACA GGAGCTAAGA
AAAGGCGACA TTATCTCAGA AGCCAATATG TCTGTTAGAA AGATCCAAGC GGACACCCTA
CCTTTAGATG CCATTCACCC TAAAGATTTT AATCAGATAG TCGGTCAGAT GTTGCTTGAG
CCTATGTCTC CTGGCCGCCC ATTAATGGGC ACCTACTTGC CTGGGCATAA AGCCGAGCAG
TTTTCAGATA TTTTAAAAGA GGGCCAACGA GCGGTAACCA TCAATATTGA TGAACTCAAC
TCAACAGCAG GCATGTTAGT ACCATCGGAT CATATCGATC TACTGCTCTC ATTTGACGAG
GAATCTGGCG ACATTGAACG CAAAAAACTT CAACTGCTTC TTGAGAATGT CACAGTTCTA
GCCACAGGAA GACAAAGTGT TGATGTTAAT CCTGAACTAG CTGACACCCT ATACGACAAT
CCAAACGCCT ATAACACAGT CACACTGGCT TTATCTGTTC ACGATGCAGC TAGAGTCACT
CTTGCGAAAG AGAAAGGCAA ATTCGTGACC TTTTTACGCA ATCAGACTGA AAGTCTGGCT
CTCGATTTTA TCTCACTTCA TGAACAACAA CTTTTCGGAC AAGCTGATGA TCTTTTAAAT
CAGGAGGTCG AGATGATTGT TGGTGGCAGT GGTATGAAAA CCACAGTACA AGCCTACCCA
CTTCCAGAAT CAGTACTTGA ACAACTTAGC CAATATAAGA ATAAGACAGC ACTATGA
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| Protein sequence | MQIKSFDFNW VLLIIAIVLG SIAAWATKNY FITKEQELIA ELSKDNIKMA QVVVATQELR
KGDIISEANM SVRKIQADTL PLDAIHPKDF NQIVGQMLLE PMSPGRPLMG TYLPGHKAEQ
FSDILKEGQR AVTINIDELN STAGMLVPSD HIDLLLSFDE ESGDIERKKL QLLLENVTVL
ATGRQSVDVN PELADTLYDN PNAYNTVTLA LSVHDAARVT LAKEKGKFVT FLRNQTESLA
LDFISLHEQQ LFGQADDLLN QEVEMIVGGS GMKTTVQAYP LPESVLEQLS QYKNKTAL
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