| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0746 |
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| Symbol | |
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| ID | 6114980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1019601 |
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| End bp | 1020464 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632231 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001759136 |
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| Protein GI | 170725110 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.271129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATT TAATTGTTAC TGTTTTCACC ATAGCATTTA TCTTCCTGAC GATAAGCAGT
ATACGTATCT ATCGCAAAGT GCCACAGGCC AATCGCGAAT TTATGGATCC GCTTTCACCG
GGCTTAAAGC TCATCTGGCC ACTGGTTCGC TTATTCGCGT TTTACGTCAG TGAAAACTTA
AGTGTTGATT ATCTAGAGAG AATATCCAAG AAACTGCAGA TCTCCGGCGT CTCCTACATG
ATGACCGCAG AACAGTATTT TGCGATCAGG ATCCTCAGTA CTCTTTTTGC TGTAGGTTTA
GCAACTATTT GCGGTCTCCT ACTCGACGAT ATCAGTATCA AGTATCTGAT CTTAGCTGGA
TTATTTGGCT ATATTTTGCC AGTTATCACC CTCAATGATC TGCGAAAAAA GCGTCAAGCA
CTCATCGTAA AATCGCTACC TGTGTACCTC GATTATTTAA CCATGTCTAT TGAAGCGGGA
TTGAATATGA CAGGCGCAAT CAGCCAAGCC GTTGAGCGTG GTCCATCAGG CCCATTGAGG
ATCGAGTTTG AAAAAGTGAT CCGAGATATG CGCGCTGGTA TGTCCCGTGC TCAATCATTT
AGAAATATGG CAGAGCGAGT ACAGATCACC GAGATAAATA GCTTAGTCAG TGCACTTGCT
CAGGCAGAAA AAACAGGTGC CAGTCTAGGC CAAACCTTAA GAGTTCAATC GGATCAGCGC
CGTATTGAAC GATTTCAACG TGCCGAAAAG AAAGCCCTAG AAGCGCCAGT TAAACTGGTT
TTTCCCCTCA TCGTATTTAT CTTTCCGGTG ACATTCATGA TTTTGGCTTT CCCCATCGCA
ATGAAGTTTA TGTATGAGCT ATAA
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| Protein sequence | MVNLIVTVFT IAFIFLTISS IRIYRKVPQA NREFMDPLSP GLKLIWPLVR LFAFYVSENL
SVDYLERISK KLQISGVSYM MTAEQYFAIR ILSTLFAVGL ATICGLLLDD ISIKYLILAG
LFGYILPVIT LNDLRKKRQA LIVKSLPVYL DYLTMSIEAG LNMTGAISQA VERGPSGPLR
IEFEKVIRDM RAGMSRAQSF RNMAERVQIT EINSLVSALA QAEKTGASLG QTLRVQSDQR
RIERFQRAEK KALEAPVKLV FPLIVFIFPV TFMILAFPIA MKFMYEL
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