| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0742 |
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| Symbol | |
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| ID | 6114976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1013931 |
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| End bp | 1017998 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632227 |
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| Product | cell surface receptor IPT/TIG domain-containing protein |
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| Protein accession | YP_001759132 |
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| Protein GI | 170725106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA AGACTCTTAA GCTAACTCAA AAGCTTTGGT TGGCTGCATT ACTCAGCGCC
ACCATGGGGA TCGCTGGCTG TAATGGAGAT CTCGAAGAGG GTGAAGGCCC AGAAAATCCA
GATCCAACGC CACCAACAAC CCCAGATCCC ACGCCCGATC CAACTCCTGA CCCCACCCCA
GATCCAACCG ATCCAGTTGA TTTAGTGGGG ACTTGGGAAA ACAAAGATGA AGATAGTGAC
GGGGTATTAG ATGAGTTTGA TGCTTATCCG TTCAACCTTG ATAAGCAATC AATGGCACTG
ATCACTGAGT TAGAGCCCAA TGATAACCCC TCTATTGCCA CGGAAACTGA GTTAGCACCA
CCTTTTGCAG TGAGTGGTGC AATTTCACAA AAATCAGATA ATGGCGATCT CTTCTCGTTT
AACGCCGAAG AGGGTGATTT CTATACACTA ACGCTAAAAT ATCAAGACCC TGATTTTAAA
CCTAACATCT ATTTTTCTGA TAAGAATGGT GATGCATTAA ACTTCGGTGT CATCGATATT
GAGCCTTCTT TAAAAACCCT TGCGATTAAC GTAGAGATAT TAGATTCAGG TCTGCATCAT
ATAGGTGTTA ATGACATCAA CTTTGATGGC AAGGAGAGCT TTACCTACCA TGTGGAGATC
TTTATCGATC AAGATGGAGA CGCCATAGAT GATATCAAAG AAGCCGCTCT AGCGATAAGC
AACTTAACCC ACGATACCGA CGGGGATACC ATTGCCGATA CAGAGGAGTT CCTTTACCCA
TTCTATTCCG ATCAAATTAG TTTTAATCCT GATAACGATG AATTACCAAA CTGGCTCGAT
TCCGATAGTG ATGACGACGG ATTATCAGAC AAGAGCGAAG GCGCTGATGA TCGTGATAAT
GATGGCATAG GTAATTTTCT CGACGACGAT TCAGATGGCA ATAGCATACT TGACCTTCAG
GAGTATGGGG ACGATGCCAG CCAACCTTTA GATACCGACT TAGATACCAC TCCCAACTAT
TTAGATCTCG ATGATGATAA CGATGGATTA CTCGATATAC ACGACCAGCA AAGACTTATC
GATATCGCGG AAGATCAAAG CAAACTGATT GGTGCTCCCT ACGTCACACA CAACAATATA
TCGGTGAACT TTCTTCGTGA AGATGATCTG GTACAAGTCA GCATTGATGA GCCTCTAAGT
GCTGAGCAGC ATTACCTGAT CTTTAAACGC AAAGGGCAAG CTCCTATTAA CCTTCCTATC
TCTGTCTCTA GCGGCATCGC TAAAGCCAAT ATTCCAGCAG GCACAGATAG TATTTTTATC
TCTGACGGGA TAAATAAAAC CAACACTAGA AATGTGACTC TTCATCCAAA AGGGACGCCA
ATCATCAGTT CATCGGGCGC ACTACTTCTA GAAGAGGAGA GTCAGACTCA ACTTCTCGGG
GCTGATTTTT CAGATGATAT GACCATCACA GCCAATGGCA CACCATTAGA GATTATTAGT
AATACTGGCT CAACCCTGAC TGTCAAAACG CCAGCATCAC TCTCTGATGG AGAGCTGCAA
ATCAATAACG CTATCGGTCA AAGCAACGCT GTTAGCTACT ATATCACCCA ACAGATTGAT
CTACAGTTAG TTGAAGTTGG AACAGTTGAT GCTGGCGAAC TAAAAATTGA GACCCTACTA
GGTTCTCAAT ATGAGCTTGA TGCCTCTAAT GCAGTTAGTG TTGAACAGTT CAAAAACCGC
CTGACTCCTG TCACCAGTTA CTTTGAAACC CAAGATGAAA ATGACGGAAA AATCTATCTT
AGTGGCTATA TGTTACCTGA AGAGGATAGC TTTTCACTGG ATATTACCAG CACTAGTTTT
AGGTATATTT TAGATTTCAT CGGGATCAAT AAGATCCCCA ATGAGCAACT CAGTAGCTTT
AAGACCGAGA TATCAAGTTA TTCAGAATTT ACTGAGGTAA CTGCCCACTT AAGTGACCAA
CTTGAGCTGT CACCAACAGC ATTAGATAAG CTAAGCAGTG AGACCACGAC TCTACTTATT
AGTAACAGTA ATGCTATTTT TGACAGATAC AATAGCAAGC AATCTGTACA ACAAAGCTCA
GGAAAAGCGA GTCAGCCTTT GAGTTATCAA GCTCAAAGTC AGCAGAAAAG CACTGGCAGT
ATTAAGCCAA CCATAGTCAA TTACGGCACA GATCACTTTG ACTACTCCCT TGAAGCAACA
AACTTTCTTG ATAATTGGCT ACCATCAGAT CCAAGCTGTC CAGATAACAG TGATATCAGT
GACGAGCAAA AAAGTAAGTT AAGTTATGAT GGTTGTGTCG AGCTACAAAA CAGAACCAAA
CTATACCTAA GCACCATGAT CATCCCCTTA GGTGAAAATG GGGAGTACGA TCCCGATCAA
CTCGACTCTC CTCTGAGGAA ACATATCAAA AACGGCTGGG ATGGTAATAT CTTAGGCCCA
CAATCTGGTA CCTTCCTAGG TTTAGAGTTT TGGTCTAAAG ATCAATACTA TAACGAGTGT
CCTTACCAAA ACTGCTTATA TCAAGTCATC GCCCCCGGCG TCGGCACACC TTTAGGCCCA
TCTCCTTTTA GCTATGTACC AAGTAGTGAC TATGACCGAG CGATCATTCA AGCTCGGCAG
AGCATAGCAA TAAGAACCAT CATAGATGGT ATTTTACTTA AGTTTTTTGA CCTCATCCTA
ACGGGAATAG GCTATGAACC GACAGGTTTC GATCCTGTTG TTATCACTAA GCTAATCATT
CAGTACTCCC CCAAACTCAT GGAGGAAGCA GAGAAGCTAT ATAATGATGA GAATATTACC
AATGAAGATA TTGAAGAGTT TGTAAAACAG GTAGCCATTG AGTTTTATAA AAATGAAGTT
GAGCTTCTAG CCGACCCTGC CAACGCAGGA AAGCTTGGGC CCATCACCAA AGCTGTACTG
CAGGAGTTAG GCGTTAGTCC TCAAGATATT GCCGTGATGG CAGCGGGAGC AGCATTAAGA
AAATGGACTC CATTTGTTGG CCAAGTAGAA GCCATTATTA CCGGTGCGCA AGTTGCCGAC
ATCTTAATTG ATCAAGTTAA AACAATTAAG GATATGGCCT TTGTTCCAGT AAAATCAGAT
TTTACTGTCA CGTGGGGATT AACCATTGTA GATATTGAAC CTAGCATCAT GAAAGCTGAA
GCGGTCGATA AACCTTTATC CATTATAGGT ACGGGCTTTG GAATTAATGA GCGCTGGTAT
TGGTTCGATG AAGAACCTAT CACATTCCTA AAGGATGAGG GGGCATCGAC TCAAGAAGTT
GAAAGAGAAC ACGATAACGT CTCTCTAGAG GGAACCTTAT TAGATATCAC AGTACCAGGA
ACGTTACTTG AAAATGCTGT CGGTCCAATC GCAGTTCGCG TCGAACATAG GGGCGAAGAG
GCGAACTCTC CAGTAAAAAT TCAAATTGGA GATGGGTTAG AGATCGCTCG TCTTAAAGCT
GACTCTGGAC AACCAGGCGA TACAGTGATT ATCGAAGGCA TAGGTTTTAG CCCACTAAAA
TCGAAAAACC GAGTCACCTT TGCAGGCAAA GATGGTCAAA GGGTCATTGC CAGTGTCAGA
AAGTCAGAGG CTGGAAAACT AACAGTTACA GTACCTAATA ACGTTATTAC TGGAGAGGTC
ACGGTAGAGG TTAATAGTGA AGTCAGCAAC GGACTAGTAT TTACTATCCC CTTTATTTTA
GATGTGACTT TTGGGGACAA TGGTAACTTT AATGATGATA TCTTCAAGTT AGTTGTAGAT
GATAAGGTCA TTACAGATGG CTCAAGCCCA CAACGGAAAG TGGGGCCAAT ATCTATCCCA
TTAAATGCTG GTTCACATAA CGTTAAGCTA GTTGGTATTC GTGCTGAAGA TGAAATTGGC
ACCTATTACA TTCAGTTTGA AGGTAATGTT ATCTCGGTGG CAGGTGATGC CTTAGAGGGA
CGCGATCTAC TCAAGGACAG TGTTAAAACT TTCCAAGTTG AAGTCGGCCC AACAAAACAA
AAAGTCACCA ATAAGGTTAA TCCACTGAAC GCTTTACAGC ATGAGTAG
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| Protein sequence | MKYKTLKLTQ KLWLAALLSA TMGIAGCNGD LEEGEGPENP DPTPPTTPDP TPDPTPDPTP
DPTDPVDLVG TWENKDEDSD GVLDEFDAYP FNLDKQSMAL ITELEPNDNP SIATETELAP
PFAVSGAISQ KSDNGDLFSF NAEEGDFYTL TLKYQDPDFK PNIYFSDKNG DALNFGVIDI
EPSLKTLAIN VEILDSGLHH IGVNDINFDG KESFTYHVEI FIDQDGDAID DIKEAALAIS
NLTHDTDGDT IADTEEFLYP FYSDQISFNP DNDELPNWLD SDSDDDGLSD KSEGADDRDN
DGIGNFLDDD SDGNSILDLQ EYGDDASQPL DTDLDTTPNY LDLDDDNDGL LDIHDQQRLI
DIAEDQSKLI GAPYVTHNNI SVNFLREDDL VQVSIDEPLS AEQHYLIFKR KGQAPINLPI
SVSSGIAKAN IPAGTDSIFI SDGINKTNTR NVTLHPKGTP IISSSGALLL EEESQTQLLG
ADFSDDMTIT ANGTPLEIIS NTGSTLTVKT PASLSDGELQ INNAIGQSNA VSYYITQQID
LQLVEVGTVD AGELKIETLL GSQYELDASN AVSVEQFKNR LTPVTSYFET QDENDGKIYL
SGYMLPEEDS FSLDITSTSF RYILDFIGIN KIPNEQLSSF KTEISSYSEF TEVTAHLSDQ
LELSPTALDK LSSETTTLLI SNSNAIFDRY NSKQSVQQSS GKASQPLSYQ AQSQQKSTGS
IKPTIVNYGT DHFDYSLEAT NFLDNWLPSD PSCPDNSDIS DEQKSKLSYD GCVELQNRTK
LYLSTMIIPL GENGEYDPDQ LDSPLRKHIK NGWDGNILGP QSGTFLGLEF WSKDQYYNEC
PYQNCLYQVI APGVGTPLGP SPFSYVPSSD YDRAIIQARQ SIAIRTIIDG ILLKFFDLIL
TGIGYEPTGF DPVVITKLII QYSPKLMEEA EKLYNDENIT NEDIEEFVKQ VAIEFYKNEV
ELLADPANAG KLGPITKAVL QELGVSPQDI AVMAAGAALR KWTPFVGQVE AIITGAQVAD
ILIDQVKTIK DMAFVPVKSD FTVTWGLTIV DIEPSIMKAE AVDKPLSIIG TGFGINERWY
WFDEEPITFL KDEGASTQEV EREHDNVSLE GTLLDITVPG TLLENAVGPI AVRVEHRGEE
ANSPVKIQIG DGLEIARLKA DSGQPGDTVI IEGIGFSPLK SKNRVTFAGK DGQRVIASVR
KSEAGKLTVT VPNNVITGEV TVEVNSEVSN GLVFTIPFIL DVTFGDNGNF NDDIFKLVVD
DKVITDGSSP QRKVGPISIP LNAGSHNVKL VGIRAEDEIG TYYIQFEGNV ISVAGDALEG
RDLLKDSVKT FQVEVGPTKQ KVTNKVNPLN ALQHE
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